Protein Alignment CCS and Sod1

DIOPT Version :10

• Sequence 1: NP_005116.1
• Gene: CCS / 9973
• HGNCID: 1613
• Length: 274
• Species: Homo sapiens
• Sequence 2: NP_476735.1
• Gene: Sod1 / 39251
• FlyBaseID: FBgn0003462
• Length: 153
• Species: Drosophila melanogaster
• Alignment Length: 148
• Identity: 66/148 - (44%)
• Similarity: 90/148 - (60%)
• Gaps: 10/148 - (6%)

Human    89 AVAILGGPGTVQGVVRFLQL---TPERCLIEGTIDGLEPGLHGLHVHQYGDLTNNCNSCGNHFNP 150
            ||.::.  |..:|.|.|.|.   ||.:  :.|.:.||..||||.|||::||.||.|.|.|.||||
  Fly     5 AVCVIN--GDAKGTVFFEQESSGTPVK--VSGEVCGLAKGLHGFHVHEFGDNTNGCMSSGPHFNP 65

Human   151 DGASHGGPQDSDRHRGDLGNVRADADGRAIFRMEDEQLKVW---DVIGRSLIIDEGEDDLGRGGH 212
            .|..||.|.|.:||.|||||:.|..|......:.|.::.::   .:|||::::....||||:|||
  Fly    66 YGKEHGAPVDENRHLGDLGNIEATGDCPTKVNITDSKITLFGADSIIGRTVVVHADADDLGQGGH 130

Human   213 PLSKITGNSGERLACGII 230
            .|||.|||:|.|:.||:|
  Fly   131 ELSKSTGNAGARIGCGVI 148

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CCS	NP_005116.1	PLN02957	14..253	CDD:215516	66/148 (45%)
		Superoxide dismutase-like	88..234		66/148 (45%)
Sod1	NP_476735.1	Cu-Zn_Superoxide_Dismutase	2..150	CDD:469976	66/148 (45%)