DRSC/TRiP Functional Genomics Resources

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Protein Alignment CDC34 and CG17030

DIOPT Version :9

Sequence 1:XP_005259747.1 Gene:CDC34 / 997 HGNCID:1734 Length:269 Species:Homo sapiens
Sequence 2:NP_647941.1 Gene:CG17030 / 38591 FlyBaseID:FBgn0035584 Length:180 Species:Drosophila melanogaster


Alignment Length:187 Identity:50/187 - (26%)
Similarity:83/187 - (44%) Gaps:39/187 - (20%)


- Green bases have known domain annotations that are detailed below.


Human     1 MARPLVPSSQKALLLELK-GLQEEPVEGFRVTLVDEGDLYNWEVAIF--GPPNTYYEGGYFKARL 62
            |..|...:.:.||:||.| .||      ||..||:..::|.|...:.  .||   |:.|.:|..:
  Fly     9 MDGPKRMNRELALMLEDKQNLQ------FRNLLVEPNNIYKWTGLLMPVAPP---YDKGAYKMEI 64

Human    63 KFPIDYPYSPPAFRFLTKMWHPNIYETGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSV 127
            .||:|||:.||.....|:|:|.|:.|.|.||:.||.            .|.|.||..:..:|..:
  Fly    65 DFPLDYPFKPPRIHINTRMYHLNVNERGQVCVPILE------------VEHWIPTTRIDQVLQVL 117

Human   128 ISLLNEPNTFSPANVDASVMYR---------------KWKESKGKDREYTDIIRTQE 169
            ::.:|:|...:..:::.:..||               |:.|.:..:.|.....|.::
  Fly   118 LATINDPQPENAWHIEMAGEYRNDPVRFFKMADAWVQKYSEPRPTEEELAKFARKRK 174

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CDC34XP_005259747.1 COG5078 6..162 CDD:227410 47/173 (27%)
UBCc 11..162 CDD:238117 47/168 (28%)
CG17030NP_647941.1 COG5078 12..158 CDD:227410 46/166 (28%)
UQ_con 14..153 CDD:278603 44/159 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.910

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