DRSC/TRiP Functional Genomics Resources

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Protein Alignment SGSM2 and GstT3

DIOPT Version :9

Sequence 1:XP_011522403.1 Gene:SGSM2 / 9905 HGNCID:29026 Length:1103 Species:Homo sapiens
Sequence 2:NP_001162808.1 Gene:GstT3 / 33047 FlyBaseID:FBgn0031117 Length:268 Species:Drosophila melanogaster


Alignment Length:244 Identity:53/244 - (21%)
Similarity:79/244 - (32%) Gaps:83/244 - (34%)


- Green bases have known domain annotations that are detailed below.


Human   271 IRKRHSSGSASEDRLAACARECVESLHQNSRTRLLYGKNHVLVQPKEDMEAVPGYLSLHQSAESL 335
            :::|..|...:..|::|..|...:.:.|.||...:..:  :...|.||....             
  Fly    27 LKRRVPSRQPTNLRMSAPIRYYYDLMSQPSRALFIIFR--LSNMPFEDCVVA------------- 76

Human   336 TLKWTPNQLMNGTLGDSELEKSVYWDYALVVPFSQVVCIHCHQQK---SGGTLVLVSQDGIQRPP 397
                    |.||.....:.:|.:.       .|.:|.|||.:..|   |...|..:|..|  :.|
  Fly    77 --------LRNGEHLTEDFKKEIN-------RFQRVPCIHDNGYKLAESVAILRYLSAKG--KIP 124

Human   398 LH--------------FPQGGHLLSFLSC-----------LENGLLP--------RGQLEPPL-- 427
            .|              |.:..|:...|:|           |..|..|        |.|:|..|  
  Fly   125 EHLYPKYFVDQSRVDEFLEWQHMSLRLTCAMYFRTVWLEPLLTGRTPSEAKIETFRMQMERNLDV 189

Human   428 ----WTQQGKGKVFPKLRKRSSIRSVDME---EMGTGRATDYVFRIIYP 469
                |.:   ||.|   ...||:...|:.   |:...|..||..||.||
  Fly   190 VEEVWLE---GKDF---LTGSSLTVADIFAACEIEQTRMADYDVRIKYP 232

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SGSM2XP_011522403.1 RUN 90..235 CDD:280855
PH_RUTBC 302..470 CDD:275431 45/213 (21%)
TBC <885..1053 CDD:214540
GstT3NP_001162808.1 GST_N_Theta 45..121 CDD:239348 20/105 (19%)
GstA 47..243 CDD:223698 48/224 (21%)
GST_C_Theta 135..259 CDD:198292 26/104 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5210
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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