DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SV2A and CG31103

DIOPT Version :9

Sequence 1:NP_001315603.1 Gene:SV2A / 9900 HGNCID:20566 Length:742 Species:Homo sapiens
Sequence 2:NP_001097914.1 Gene:CG31103 / 43030 FlyBaseID:FBgn0051103 Length:506 Species:Drosophila melanogaster


Alignment Length:583 Identity:123/583 - (21%)
Similarity:218/583 - (37%) Gaps:150/583 - (25%)


- Green bases have known domain annotations that are detailed below.


Human   152 YEAILRECGHGRFQWTLYFVLGLALMADGVEVFVVGFVLPSAEKDMCLSDSNKGMLGLIVYLGMM 216
            |:.:|.:.|:|:.||.|..|.||..:........:..::.:::.:...:.:.||::......|:.
  Fly    17 YDMVLEKIGYGKTQWVLLLVSGLLTITSVAAQQAMSIIVIASQCEFETTQAEKGVMMAASVTGIF 81

Human   217 VGAFLWGGLADRLGRRQCLLISLSVNSVFAFFSSFVQGYGTFLFCRLLSGVGIGGSIPIVFSYFS 281
            :..::||.::|.:|||:.||.....::...|...||.....|....||.|:.:|.....:::|.|
  Fly    82 LSTYIWGYISDDIGRRRVLLYGNFASNALQFVLMFVTSVWLFNIINLLVGISVGAVSAALYAYLS 146

Human   282 EFLAQEKRGEHLSWLCMFWMIGGVYAAAMAWAIIPHYGWSFQMGSAYQFHSWRVFVLVCAFPSVF 346
            ||.....|...:::..||..:..:|..|.||.::.. .|:..||. :.|..||:.:||...|...
  Fly   147 EFNIPRHRAVAINYSTMFVSVTAIYVPATAWLVLSS-NWAITMGD-FVFRPWRLLLLVSLLPGFI 209

Human   347 AIGALTTQPESPRFFLENGKHDEAWMVLKQVHDTNMRAKGHPERVFSVTHIKTIHQEDELIEIQS 411
            ....|...||||:|.|...|::||...:..:...| |.|. .::|.|.... |:..||.:.|   
  Fly   210 GGLILLYYPESPKFLLSQEKNNEAIEAVAWISKFN-RGKS-IQQVLSCDEF-TLKSEDPVGE--- 268

Human   412 DTGTWYQRWGVRALSLGGQVWG---------------------NFLSCFGPEYRRITLMMMGVWF 455
                          :|.|:..|                     ||:.|        .|.:.|   
  Fly   269 --------------NLLGESQGCGILSKICRATIPLFHKPHGFNFILC--------NLALFG--- 308

Human   456 TMSFSYYGLTVWFPDMIRHLQAVDYASRTKVFPGERVEHVTFNFTLENQIHRGGQYFNDKFIGLR 520
             |.||..|:.:|||:::......:..|.|..                            :.:.:.
  Fly   309 -MFFSSNGMQLWFPEIVNRSSGAENNSSTVC----------------------------EILSVP 344

Human   521 LKSVSFEDSLFEECYFEDVTSSNTFFRNCTFINTVFYNTDLFEYKFVNSRLINSTFLHNKEGCPL 585
            ::..:..::|  :|  .|..||.|:..|.                                    
  Fly   345 VEQPNVTETL--DC--TDPISSKTYIDNL------------------------------------ 369

Human   586 DVTGTGEGAYMVYFVSFLGTLAVLPGNIVSALLMDKIGRLRMLAGSSVMSCVSCFFLSFGNSESA 650
             |.|                .|.|.|..:..|:::.:||..:|..:..::.:|...|.|..|.:.
  Fly   370 -VVG----------------FAFLIGFSIQGLILNPLGRKNVLLAALAVATLSGVLLHFMESPTG 417

Human   651 MIALLCLF---GGVSIASWNALDVLTVELYPSDKRTTAFGFLNALCKLAAVLGISIFTSFVGI 710
            ::.|.||:   .|:||   :.:....|:|.|:..|:.|..|    |.....|||...|:.:|:
  Fly   418 VLVLFCLYILLPGLSI---SIMIGAIVDLVPTHLRSKAVSF----CMSLGRLGIIAATNLMGV 473

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SV2ANP_001315603.1 synapt_SV2 1..742 CDD:130366 123/583 (21%)
Interaction with SYT1. /evidence=ECO:0000250 1..57
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 33..144
CG31103NP_001097914.1 2A0115 29..475 CDD:273327 119/571 (21%)
MFS 34..>189 CDD:119392 34/155 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S5294
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D208328at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.870

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