DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SV2B and CG6356

DIOPT Version :9

Sequence 1:NP_001309960.1 Gene:SV2B / 9899 HGNCID:16874 Length:683 Species:Homo sapiens
Sequence 2:NP_651240.1 Gene:CG6356 / 42893 FlyBaseID:FBgn0039178 Length:570 Species:Drosophila melanogaster


Alignment Length:680 Identity:126/680 - (18%)
Similarity:204/680 - (30%) Gaps:236/680 - (34%)


- Green bases have known domain annotations that are detailed below.


Human    38 GHDEEDEIYEGEYQGIPHPDDVKAKQAKMAPSRMDSLRGQTDLMAERLED------EEQLAH--- 93
            ||..:|     ::.|||...|.....|:           :.:::|:.|:.      :....|   
  Fly    63 GHLPDD-----QWCGIPELQDTNWTHAQ-----------KREIVAKGLDSGGCTVWDWNYGHLAK 111

Human    94 -QYETIMDECGHGRFQWILFFVLGLALMADGVEVFV-----VSFALPS----AEKDM-CLSSSKK 147
             .||..::..||            |..::...||..     ..||.|.    |:.|: |..|.::
  Fly   112 MSYEAALNYTGH------------LTQISPPAEVSCRVKGQHEFAHPETTFVADWDLTCDRSIQR 164

Human   148 GMLGMIVYLGMMAGAFILGGLADKLGRKRVLSMSLAVNASFASLSSFV----QGYGAFLFCRLIS 208
            ....:.:.||...|:|..|.||||.|||    .|..:.|:|..:.||.    ..|..||..|...
  Fly   165 TSAQVSISLGKFCGSFSFGILADKFGRK----SSFTLGAAFFIVGSFFCTFSPWYSLFLAGRFAL 225

Human   209 GIGIGGALPIVFAYFSEFLSREKRGEHLSWLGIFWMTGGLYASAMAWSIIPHYGWGFSMGTNYHF 273
            |....|.....|....|.:..    :|.||:.|.:...  |...|....|          ..|..
  Fly   226 GAASSGLFYPAFTMIVENICL----KHRSWMSIAFSAS--YPVGMIILAI----------VGYVI 274

Human   274 HSWRVFVIVCALPCTVSMVALKFMPESPRFLLEMGKHDEAWMIL--KQVHDTNMRAKGTPEKVFT 336
            ..||...:...:|..:.::....|.||||:|:...::|..:.||  :..|.....|...|.:|.:
  Fly   275 QPWRHLQLALTIPSLLLILNCYLMSESPRWLITNQRYDRVYKILFRQPSHYQIQPAVAAPSQVAS 339

Human   337 VSNIKTPKQMDEFIEIQSSTGTWYQRWLVRFKTIFKQVWDNALYCVMGPYRMNTLILAVVWFAMA 401
            ......|::                                                       .
  Fly   340 DKKSLEPEE-------------------------------------------------------G 349

Human   402 FSYYGLTVWFPDMIRYFQDEEYKSKMKVFFGEHVYGATINFTMENQIHQHGKLVNDKFTRMYFKH 466
            ||                           ||:.:....:...:|       ...|.|..||.|. 
  Fly   350 FS---------------------------FGQKLKNGPLKSIIE-------LYANSKVRRMIFA- 379

Human   467 VLFEDTFFDECYFEDVTSTDTYFKNCTIESTIFYNTDLYEHKFINCRFINSTFLEQKEGCHMDLE 531
                                :||..| :.|..:|.|.|........|:                 
  Fly   380 --------------------SYFMFC-VTSLSYYVTALNAANLSVSRY----------------- 406

Human   532 QDNDFLIYLVSFLGSLSVLPGNIISALLMDRIGRLKMIGGSMLISAVCCFFLFFGNSESAMI--- 593
                  :|::.  ..|..:|..::..:::...||           .:...|||.....|.::   
  Fly   407 ------LYIIG--TGLVDIPSYLVPVIMLRFTGR-----------RLTTMFLFLWTGVSLLLVLA 452

Human   594 ------GWQCLFC-----GTSIAAWNALDVITVELYPTNQRATAFGILNGLCKFGAILGNTIFAS 647
                  .|...|.     |.| |.::.:.:.|.|||||..|.:|.|..:.....|:|....:...
  Fly   453 VPAGSTTWIVAFAMLGRFGIS-ATYSVVTLYTAELYPTQIRNSALGTCSTFAHVGSISAPYVVDV 516

Human   648 FVGITKVVPILLAAASLVGGGLIALRLPET 677
            ...:...:|..:....::..||:.|.||||
  Fly   517 LGALGWYIPTTICGCCVLVAGLLTLTLPET 546

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SV2BNP_001309960.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..42 2/3 (67%)
Sugar_tr 8..683 CDD:331684 126/680 (19%)
CG6356NP_651240.1 MFS 167..544 CDD:119392 97/544 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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