DRSC/TRiP Functional Genomics Resources

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Protein Alignment TBC1D4 and RN-tre

DIOPT Version :10

Sequence 1:NP_055647.2 Gene:TBC1D4 / 9882 HGNCID:19165 Length:1298 Species:Homo sapiens
Sequence 2:NP_652381.1 Gene:RN-tre / 36554 FlyBaseID:FBgn0020620 Length:571 Species:Drosophila melanogaster


Alignment Length:481 Identity:111/481 - (23%)
Similarity:200/481 - (41%) Gaps:98/481 - (20%)


- Green bases have known domain annotations that are detailed below.


Human   813 EEEPLVVFLSGEDDPEKIEERKK----SKELRSLWRKAIHQQILLLRMEK----ENQKLEASRDE 869
            ::|.||  ...||:.|.|..|.:    ...:...|.....:  :..|.:|    .:.:|.::||.
  Fly     6 QQEALV--KRAEDEREDIFRRYELGLDPSNVVDSWENPTFE--IYHRTDKYGFLHDSRLPSTRDA 66

Human   870 LQSRKVKLDYEEVGACQKEVLITWDKKLLNCRAKIRCDMEDIHTLLKEGVPKSRRGEIW-QFLAL 933
            .:..:.|::.|.            |||.:....:.....:.:|..:.:|:|...|...| :.|.:
  Fly    67 QEVHRNKIEMER------------DKKWMKMLNQWPPPQDKLHKRVYKGIPDRVRMVAWNKLLDI 119

Human   934 QYRLRHRLPNKQQPPDISYKELLKQLTAQQHAILVDLGRTFPTHPYFSVQLGPGQLSLFNLLKAY 998
            |..:     |......:...:|.::.:.:...|..|:.|.|..:..|..:....|.||||:|.||
  Fly   120 QQSI-----NNNAGVYLRMLQLARKYSTETRQIDADVNRQFRDNLAFRERYSVKQCSLFNVLNAY 179

Human   999 SLLDKEVGYCQGISFVAGVLLLHMSEEQAFEMLKFLMYDLGFRKQYRPDMMSLQIQMY-QLSRLL 1062
            |:.:.|:|||||::.|||||||::.||:||..|..|:.|    ::|  .|..|.|:.: :|:|.:
  Fly   180 SIYNSELGYCQGMACVAGVLLLYLHEEEAFWALNTLITD----QKY--GMHGLFIEGFPKLTRFI 238

Human  1063 HDYH--------RDLYNHLEENEISPSLYAAPWFLTLFASQFSLGFVARVFDIIFLQGTEVIFKV 1119
             |:|        |.|:.|..::.:...|||..||..:|..:.......||:||..|.|..||..:
  Fly   239 -DHHDRIMSKIMRKLHKHFTKHNVDALLYAIKWFFVVFVERVPFSLSLRVWDIFMLDGDRVILSM 302

Human  1120 ALSLLSSQETLIMECESFENIVEFLKNTLPDMNTSEMEKIITQVFEMDISKQLHAYEVEYHVLQD 1184
            |:::|...:..::..:..:.|:|:|                               :|..|    
  Fly   303 AITILYLHKDELLRLKDMDAIIEYL-------------------------------QVRLH---- 332

Human  1185 ELQESSYSCEDSETLEKLERANSQLKRQNMDLLEKLQVAHTKIQAL----ESNLENLLTRETK-- 1243
                .::...|.:.::.|||...:||...:|:....:......:.|    |:::|..:.|...  
  Fly   333 ----KNFGYSDDDAIQALERVMKKLKDLKLDVPPPAKSNEFPTRKLGDFVEADMEKKIGRRRNDY 393

Human  1244 -------MKSLIRTLEQEKMAYQKTV 1262
                   :..:|...||..:..|.||
  Fly   394 TDAEKQVITDVISRQEQNAIDVQSTV 419

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TBC1D4NP_055647.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..31
PTB 31..190 CDD:214675
PTB_TBC1D1_like 193..437 CDD:269967
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 241..287
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 317..353
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 586..685
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 725..765
DUF3350 801..864 CDD:463365 11/58 (19%)
TBC 918..1132 CDD:214540 69/223 (31%)
COG4372 1161..>1267 CDD:443500 19/115 (17%)
RN-treNP_652381.1 TBC 100..315 CDD:214540 69/226 (31%)
Blue background indicates that the domain is not in the aligned region.

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