DRSC/TRiP Functional Genomics Resources

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Protein Alignment HDAC4 and HDAC11

DIOPT Version :10

Sequence 1:XP_011510519.1 Gene:HDAC4 / 9759 HGNCID:14063 Length:1113 Species:Homo sapiens
Sequence 2:NP_733048.1 Gene:HDAC11 / 326120 FlyBaseID:FBgn0051119 Length:343 Species:Drosophila melanogaster


Alignment Length:361 Identity:74/361 - (20%)
Similarity:128/361 - (35%) Gaps:107/361 - (29%)


- Green bases have known domain annotations that are detailed below.


Human   704 HPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLE--ELQTVH-------SEAHTLL-------- 751
            |.|.....:.:|.:..:....||...:..|...:.  .|:.:|       ...|.||        
  Fly     9 HHEEQESEEVVWVKRDDARSAGKLPIVFSRNYAVRFGGLERLHPFDAAKGKHIHKLLCAQLQLDD 73

Human   752 ---YGTNPLNR---QKLDSKKLLGSLASVFVRLPCGGVGVDSDTIWNEVHSAGAARLAVGCVVE- 809
               |....|.:   :::.:::.|.||.                  |:         :.|.|:.| 
  Fly    74 GSFYEPTELTKDQLRRIHTREYLKSLR------------------WS---------MNVACIAEV 111

Human   810 ---------------------------LVFKVATGELKNGFAVVRPPG-HHAEESTPMGFCYFNS 846
                                       |..|:|   |..|:|:....| ||.......|||.:..
  Fly   112 PLMAFVPNRYIQRSYLRPMRFQAAGSILAGKLA---LDYGWAINLGGGFHHCCSYRGGGFCPYAD 173

Human   847 VAVAAKLL--QQRLSVSKILIVDWDVHHGNGTQQAFYSDPSVLYMSLHRYDDGNFFPGSGAPDEV 909
            :::....|  |:...|.:|:|||.|.|.|||.::.|.:..:|....::   :...:|......| 
  Fly   174 ISLLIVRLFEQEPFRVRRIMIVDLDAHQGNGHERDFNNVAAVYIFDMY---NAFVYPRDHVAKE- 234

Human   910 GTGPGVGFNVNMAFTGGLDPPMGDAEYLAAFRTVVMPIASEFAPDVVLVSSGFDAVEGHPTPLGG 974
                    ::..|..  |.....|..||...:..:|...:||.||:|:.::|.|.:||  .|||.
  Fly   235 --------SIRCAVE--LRNYTEDGFYLRQLKRCLMQSLAEFRPDMVVYNAGTDVLEG--DPLGN 287

Human   975 YNLSARCFGYLTKQLMGLA-----GGRIVLALEGGH 1005
            ..:||.  |.:.:..:..:     |..:|:.|.||:
  Fly   288 LAISAE--GVIERDRLVFSTFRALGIPVVMLLSGGY 321

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HDAC4XP_011510519.1 ClassIIa_HDAC4_Gln-rich-N <115..176 CDD:197398
HDAC4 678..1086 CDD:212530 74/361 (20%)
HDAC11NP_733048.1 HDAC_classIV 51..336 CDD:212519 67/319 (21%)
Blue background indicates that the domain is not in the aligned region.

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