DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment FRMPD4 and CG42788

DIOPT Version :10

Sequence 1:NP_001355324.1 Gene:FRMPD4 / 9758 HGNCID:29007 Length:1799 Species:Homo sapiens
Sequence 2:NP_731964.2 Gene:CG42788 / 41817 FlyBaseID:FBgn0261859 Length:1560 Species:Drosophila melanogaster


Alignment Length:1222 Identity:343/1222 - (28%)
Similarity:548/1222 - (44%) Gaps:266/1222 - (21%)


- Green bases have known domain annotations that are detailed below.


Human    45 EGE-HICHHRTKSSGWPPPSGTWGLSQVPPYGWEMTANRDGRDYFINHMTQAIPFDDPRLESCQI 108
            ||. :.|:|.|:|:||.|....|...:...||||...:..||.|:|||:.:...::.|.......
  Fly   188 EGRLYYCNHMTQSAGWLPACEDWSKHEELSYGWERAIDSKGRSYYINHLNKTTTYEAPECIRWDE 252

Human   109 IPPAPRKVEMRRDPVLGFGFVAGSEKPVVVRSVTPGGPSEGKLIPGDQIVMINDEPVSAAPRERV 173
            .||.||:|:::|:..||||||||||:||:||.||.||||.|||.|||||:.:|.|.|..|||:.|
  Fly   253 HPPEPRQVQLQRNASLGFGFVAGSERPVIVRFVTEGGPSIGKLQPGDQILAVNGEDVKDAPRDHV 317

Human   174 IDLVRSCKESILLTVIQP-----YPSPKSAFISAAKKARLKSNPVKVRFSEEVIING-----QVS 228
            |.|||:|:..:.|.|.||     .|..||..:||.|:|:|:|.|.:|||:|.|.:||     ..:
  Fly   318 IQLVRACESQVNLLVCQPMAHCVLPGRKSTLLSAGKRAKLRSRPSRVRFAESVCVNGAPLFPPSA 382

Human   229 ETVKDNSLLFMPNVLKVYLENGQTKSFRFDCSTSIKDVILTLQEKLSIKGIEHFSLMLEQRTEGA 293
            .::.|..:..|.|||||:|||||||||::|.:|:::||:.:|.:||.:...|.|||:||......
  Fly   383 FSLGDICVPPMANVLKVFLENGQTKSFKYDATTTVQDVVSSLLDKLCLCCGELFSLVLEHVKSLK 447

Human   294 GTKLLLLHEQETLTQVTQRPSSHKMRCLFRISFVPKDPIDLLRRDPVAFEYLYVQSCNDVVQERF 358
            ..||.||..||:|.::..||.:||:||||||:|||....:|.:||..|.:|||:|.||||.||||
  Fly   448 RNKLTLLDPQESLARIAARPGAHKLRCLFRITFVPISAAELAQRDLHALDYLYLQCCNDVNQERF 512

Human   359 GPELKYDIALRLAALQMY-IATVTTKQTQKISLKYIEKEWGLETFLPSAVLQSMKEKNIKKALSH 422
            .|||:.::|||||||.|: .|........|:::|.:|:|:|||.|:|.::.:.||.|.:::.:||
  Fly   513 APELQPELALRLAALHMHQHALANNFAPAKLTVKLVEREFGLERFVPVSLFEGMKRKELRRLISH 577

Human   423 LVKANQNLVPPGKK-LSALQAKVHYLKFLSDLRLYGGRVFKATLVQAEKRSEVTLLVGPRYGISH 486
            .:|.|..:.....| |:.||||:|||..::.|..||.:.|.....:..:|   .|||.||:|:|.
  Fly   578 FLKLNAEMTGSSSKVLTQLQAKLHYLDIIASLPSYGAKCFSTNQREGVER---VLLVSPRFGLSQ 639

Human   487 VINTKTNL----VALLADFSH--VNRIEMFSEEESLVRVELHVLDVKPITLLMESSDAMNLACLT 545
            :.:.:.::    ::.:.||:|  |||     |::....|.:.:|..:.:..:||..|....:.:.
  Fly   640 ISSARNSVQPQPISAIEDFTHVVVNR-----EDDVTCSVSIFMLGDRAVKFIMEDRDGCEFSLVL 699

Human   546 AGYYRLLVDSRRSIFNMANKKNTATQETGPENKGKHNLLGPDWNCIPQMTT------FI------ 598
            .||||||..   ::.|:..::....::..|....:|.:|...|:.:....|      |:      
  Fly   700 GGYYRLLTG---NVLNILREREPNDEDNAPGFLSQHTVLPAGWSYLLPFHTRAHSVNFLMAPPYH 761

Human   599 -----GEGEQEAQITYIDSKQKTVEITDSTMCPKEHRHLYIDNAYSSDGLNQQLSQPGEAPCEAD 658
                 |:.:|::.|....|....:::...::...|    .::.|....||:   ...|...||. 
  Fly   762 PLVQRGQLQQQSSIQAPSSLPYVMDLDLHSVMATE----LLEEAAKDSGLS---DSSGSNYCEG- 818

Human   659 YRSLAQRSLLTLSGPETLKKAQE------------------------------------------ 681
             ||......|.....:.|::.||                                          
  Fly   819 -RSHLGSHQLEAKNEQVLRRVQELQHLVQTSEQYLSEQEQGGGGGGVAMLEFDSDCDSLNSSKVS 882

Human   682 SPRGAKVSFIFGDFALDDGISPP----------TLGYETL----------LDEGPEML------- 719
            |..|::...|.|..|    |.||          ||..||:          |:..||..       
  Fly   883 STEGSQGGTILGPGA----IIPPGHPLKHSDSLTLLAETINHELSGITQGLNAIPESAPVSTSAP 943

Human   720 --------------------EKQRNLYIGSANDMK--GLDLT--------------------PEA 742
                                :::.|.:....:|::  |.|.:                    |:.
  Fly   944 PTPATPKRKPSLCSTSSPRPQRKLNGFSQLLSDLQALGTDFSQSESDSESVASPAQSPTTRRPQM 1008

Human   743 EGIQFVENSVYANIGDVK---SFQAAEGIEEPLLHDICYAENTDD----------AEDEDEVSCE 794
            ..:|...:|. .::...|   |.:::.|:..|  ....:...|.|          .|..:..|.:
  Fly  1009 MLLQAAGSSA-GSVAPAKQQLSQRSSFGLHSP--DGTHFGAETKDYNLREYLQQLKEISNAASAD 1070

Human   795 EDLVVGEMNQPAILNLSGSSD-------DIIDLTSLPPPEGDDNEDDFLLRSLNMAIAAPPPGFR 852
            .|:...::::  |.......|       |:|||.::|||:..|..|     ||::..||||.||.
  Fly  1071 TDVAARQLSE--IYGFEVREDTFIETDTDLIDLRAIPPPQTPDELD-----SLSLMNAAPPKGFE 1128

Human   853 DSSDEEDSQSQAASFPEDKEKGS---SLQNDEIPVSLIDAVPTSAEGKCEKGLDNAVVSTLGALE 914
            ..::|.||..|........:|.:   .|..:|| :|.|...|.:.|.:                :
  Fly  1129 GKAEELDSFLQQIMVAPPTQKATPAKELTPEEI-MSFIIPPPPNLEQQ----------------Q 1176

Human   915 ALSVSEEQQTSDNSGVAILRAYSPESSSDSGNETNSSEMTESSELATAQKQSENLSRMFL---AT 976
            .::..|.:....||..|....:...::.::|..::|..:.   |.||.:::|:     |.   .:
  Fly  1177 VVAPVETECLYSNSVQAKREFFQSVANGNNGTVSHSPHII---EYATVERKSK-----FSCCPTS 1233

Human   977 HEGYHPLAEEQTEFPASKT-----PAGGLPPKSSHALAARPATDLPPKVVPSKQLLHSDHMEMEP 1036
            .:...|..||....|.:.|     |....||||:         :|..:..|.||:..:....|:|
  Fly  1234 KKEEQPGQEELQPPPRTPTTEQLSPPPARPPKSA---------ELLQRYSPKKQVRIAASPVMQP 1289

Human  1037 ETMETKSVTDYFSKLHMGSVAYSCTSK---RKSKLADGEGKAPPNGNTTGKK 1085
            :  |.:.:               |..:   |.|...||...:|.|..:..||
  Fly  1290 Q--ERREL---------------CPPQLPPRGSPTLDGSQSSPTNAVSGPKK 1324

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FRMPD4NP_001355324.1 WW 73..103 CDD:238122 11/29 (38%)
PDZ_FRMPD1_3_4-like 115..189 CDD:467250 43/73 (59%)
FERM_F1_FRMPD4 238..331 CDD:340690 48/92 (52%)
B41 242..461 CDD:214604 102/220 (46%)
FERM_C_FRMPD1_FRMPD3_FRMPD4 457..561 CDD:270004 28/109 (26%)
LGNbd_FRMPD4 1012..1060 CDD:409274 7/47 (15%)
CG42788NP_731964.2 WW 177..203 CDD:459800 6/14 (43%)
WW 218..246 CDD:238122 10/27 (37%)
PDZ_FRMPD1_3_4-like 259..333 CDD:467250 43/73 (59%)
FERM_F1_FRMPD1_like 393..482 CDD:340608 46/88 (52%)
B41 396..617 CDD:214604 102/220 (46%)
PH-like 613..715 CDD:473070 29/112 (26%)
PHA03247 <1105..1377 CDD:223021 62/276 (22%)

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