DRSC/TRiP Functional Genomics Resources

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Protein Alignment SETD1A and SET1

DIOPT Version :10

Sequence 1:NP_055527.1 Gene:SETD1A / 9739 HGNCID:29010 Length:1707 Species:Homo sapiens
Sequence 2:NP_011987.1 Gene:SET1 / 856519 SGDID:S000001161 Length:1080 Species:Saccharomyces cerevisiae


Alignment Length:437 Identity:153/437 - (35%)
Similarity:212/437 - (48%) Gaps:111/437 - (25%)


- Green bases have known domain annotations that are detailed below.


Human  1355 QQQREEGEEEGEEEGEEEEEESSDSSSSSDGEGALRRRSLRSHARRRRPPP-------------- 1405
            ::..||.|.......||||||:.|....|:.| .....|...|..:...|.              
Yeast   671 KEHDEEDENMTSSSSEEEEEEAPDKKFKSESE-PTTPESDHLHGIKPLVPDQNGSSDVLDASSMY 734

Human  1406 -------PPPPPPPRAYEPRSEFEQMTILYDIWNSGLDSEDMSYLR-----------------LT 1446
                   |.|..||..|:  .::.|.....|:.|:..|.|||..|:                 |.
Yeast   735 KPTATEIPEPVYPPEEYD--LKYSQTLSSMDLQNAIKDEEDMLILKQLLSTYTPTVTPETSAALE 797

Human  1447 YE------RLLQQTSGADW---LNDTHWVHHTITNLTTPKRKRRPQDGPREHQTGSA-RSEGYYP 1501
            |:      ::|::...:||   ||.|.:                    ..|.|.||: ::||:..
Yeast   798 YKIWQSRRKVLEEEKASDWQIELNGTLF--------------------DSELQPGSSFKAEGFRK 842

Human  1502 ISKKEKDKYL--------------------DVCPVSARQLEGVDTQGTNRVLSE------RRSEQ 1540
            |:.|.|..||                    :..|...::.|..:.:.::.|..|      .|:..
Yeast   843 IADKLKINYLPHRRRVHQPLNTVNIHNERNEYTPELCQREESSNKEPSDSVPQEVSSSRDNRASN 907

Human  1541 RRL-------LSAIGTSAIMDSDLLKLNQLKFRKKKLRFGRSRIHEWGLFAMEPIAADEMVIEYV 1598
            ||.       .:||||    :|:||.||||..|||.:.|.||.||.|||:|::.|||.||:||||
Yeast   908 RRFQQDIEAQKAAIGT----ESELLSLNQLNKRKKPVMFARSAIHNWGLYALDSIAAKEMIIEYV 968

Human  1599 GQNIRQMVADMREKRYVQEGIGSSYLFRVDHDTIIDATKCGNLARFINHCCTPNCYAKVITIESQ 1663
            |:.|||.||:||||||::.|||||||||||.:|:|||||.|.:||||||||.|||.||:|.:..:
Yeast   969 GERIRQPVAEMREKRYLKNGIGSSYLFRVDENTVIDATKKGGIARFINHCCDPNCTAKIIKVGGR 1033

Human  1664 KKIVIYSKQPIGVDEEITYDYKFPLE---DNKIPCLCGTESCRGSLN 1707
            ::||||:.:.|...||:||||||..|   :.::|||||..:|:|.||
Yeast  1034 RRIVIYALRDIAASEELTYDYKFEREKDDEERLPCLCGAPNCKGFLN 1080

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SETD1ANP_055527.1 Interaction with WDR82. /evidence=ECO:0000269|PubMed:37030068 60..89
RRM_Set1A 92..186 CDD:409964
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 194..308
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 331..363
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 381..486
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 506..655
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 834..854
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 891..1251
PRK12323 <1070..>1130 CDD:481241
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1264..1293
HCFC1-binding motif (HBM) 1299..1303
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1307..1417 20/82 (24%)
Interaction with CFP1 1415..1450 11/57 (19%)
N-SET 1425..1562 CDD:463344 41/196 (21%)
Interaction with ASH2L, RBBP5 and WDR5. /evidence=ECO:0000269|PubMed:17998332 1450..1537 21/116 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1472..1499 5/27 (19%)
WDR5 interaction motif (WIN). /evidence=ECO:0000269|PubMed:22266653, ECO:0000269|PubMed:22665483 1492..1497 2/5 (40%)
RxxxRR motif. /evidence=ECO:0000250|UniProtKB:P38827 1537..1542 1/4 (25%)
SET_SETD1 1556..1703 CDD:380946 90/149 (60%)
SET1NP_011987.1 AF-4 <11..>136 CDD:461550
RRM_scSet1p_like 246..360 CDD:409743
SET_assoc 422..486 CDD:432058
N-SET 763..932 CDD:463344 41/192 (21%)
SET_SET1 926..1076 CDD:380998 90/149 (60%)
Blue background indicates that the domain is not in the aligned region.

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