DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment HERPUD1 and Herp

DIOPT Version :9

Sequence 1:NP_055500.1 Gene:HERPUD1 / 9709 HGNCID:13744 Length:391 Species:Homo sapiens
Sequence 2:NP_609151.2 Gene:Herp / 34065 FlyBaseID:FBgn0031950 Length:465 Species:Drosophila melanogaster


Alignment Length:484 Identity:140/484 - (28%)
Similarity:206/484 - (42%) Gaps:143/484 - (29%)


- Green bases have known domain annotations that are detailed below.


Human     4 ETEPE-PVTLLVKSPNQRHRDLELSGDRGWSVGHLKAHLSRVYPERPRPEDQRLIYSGKLLLDHQ 67
            :..|| .|.||:||.||::.||.:..|..|:|..||.|||.:||.:|..:||:||||||||.|.|
  Fly    22 QKNPETSVRLLIKSSNQQYEDLNVDSDLCWTVQRLKKHLSLIYPGKPLIQDQKLIYSGKLLDDSQ 86

Human    68 CLRDLLPK----QEKRHVLHLVCN----VKSPSKMPEINAKVAESTEEPAGSNRGQYPE-DSSSD 123
            .:.:::..    .::.|:.||||.    ::..:|.|.:..|.|    .|||      || ..:::
  Fly    87 KISEVIRSYKDVYQQHHIFHLVCASKQVIRPAAKAPTVPQKDA----VPAG------PEVTGNAN 141

Human   124 GLRQREVLR-----------------NLSSPGWENISRPEAAQQAFQGLGPGF-SGYTPYGWLQL 170
            .||||....                 .|::| |.:.      .|..||..|.. :..:|:...|.
  Fly   142 ELRQRHAPHQQQAQQGNAGPHVTGDIGLANP-WTHF------WQQSQGAAPAANASASPHALFQQ 199

Human   171 ------SWFQQIYARQYYMQYLAATAA------SGAFVPPPSAQEIPVVSAPAPAPIHNQFPAEN 223
                  :|.||.||:  |||.|...:.      ||  :|||:...:|.|    |......|....
  Fly   200 QALIYNAWMQQAYAQ--YMQQLTLRSTLPGSNQSG--LPPPTQPLLPSV----PLIAGRNFGEVQ 256

Human   224 QPANQNAAP--QVVVNP---GANQNLRMNAQGGPIVEEDDEINRDWLDWTYSAATFSVFLSILYF 283
            |.|...|||  ||..:|   ||.||     :..|.::|:.|:: ||||..:|....::|:::|||
  Fly   257 QVAGAAAAPAAQVPADPQINGAPQN-----RNFPNIQEEPEMH-DWLDSFFSFTRLAIFVTVLYF 315

Human   284 YSSLSRFLMVMGATVVMYLHHVGWFPFRPRPVQNFPNDGPPPDVVNQDPNNNL------------ 336
            .||..|.|:|:.....:||:|:|  ..|.|..:|..|       :|:  |||.            
  Fly   316 NSSALRCLLVVLIAGAIYLYHIG--VLRRRRERNNNN-------INR--NNNAGDAAAFAAVQQI 369

Human   337 ---------QEGTDPE-TEDPNHLPP-------DRDVLD----GEQTSP---------------- 364
                     :|..||: ..:|..:|.       ::|.:|    |...:|                
  Fly   370 QRMMDAAVQRENNDPQAANEPGAVPAAGPAAAGEQDAIDAPPAGAPVAPASAANPEPTDVSAEAV 434

Human   365 -------SFMSTAWLVFKTFFASLLPEGP 386
                   |.:|.......|||.|||||.|
  Fly   435 EPPNANNSVISVVRTFVITFFTSLLPEAP 463

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HERPUD1NP_055500.1 Ubl_HERP1 9..86 CDD:340638 35/80 (44%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 100..126 7/26 (27%)
Interaction with UBQLN1. /evidence=ECO:0000269|PubMed:18307982 115..200 28/115 (24%)
Interaction with SYVN1. /evidence=ECO:0000269|PubMed:28827405 170..190 9/25 (36%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 318..359 12/73 (16%)
HerpNP_609151.2 Herp_N 28..110 CDD:176385 36/81 (44%)
UBQ 29..110 CDD:214563 36/80 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165157108
Domainoid 1 1.000 74 1.000 Domainoid score I9171
eggNOG 1 0.900 - - E1_KOG4583
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 142 1.000 Inparanoid score I4472
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG45891
OrthoDB 1 1.010 - - D1251727at2759
OrthoFinder 1 1.000 - - FOG0003073
OrthoInspector 1 1.000 - - otm42028
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR12943
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4127
SonicParanoid 1 1.000 - - X2439
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1413.900

Return to query results.
Submit another query.