DRSC/TRiP Functional Genomics Resources

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Protein Alignment CROCC and che-10

DIOPT Version :10

Sequence 1:NP_055490.4 Gene:CROCC / 9696 HGNCID:21299 Length:2017 Species:Homo sapiens
Sequence 2:NP_494819.3 Gene:che-10 / 173801 WormBaseID:WBGene00018051 Length:1955 Species:Caenorhabditis elegans


Alignment Length:341 Identity:72/341 - (21%)
Similarity:130/341 - (38%) Gaps:68/341 - (19%)


- Green bases have known domain annotations that are detailed below.


Human    54 SALKKETDASKTMETVSSSSSAKSGQIKSSTVKVNK-----CAGKSAGSVKSVVT-VAAKG-KAS 111
            :.|.|..|....:..::...:|:   ||::.|..|.     |..:.......:.| :..|| :.:
 Worm   231 NGLCKRGDIDLALNLLNKMEAAR---IKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPN 292

Human   112 IKTAKS--------GKKSLEAKKSGNIKNKDSNKPVTVPANSEIKASSEDKATGKSAEESPSGTL 168
            :.|..|        |:.|..::...|:..|..| |..|..|:.|.|..::   ||..|      .
 Worm   293 VVTYNSLINCLCNYGRWSDASRLLSNMLEKKIN-PNVVTFNALIDAFFKE---GKLVE------A 347

Human   169 EATEKEPVNKESEEMSVVFISNLPNKGYSTEEIYNLAK---PFGALKDILVLSSHKKAYIEINKK 230
            |...:|.:.:..:..::.:  ||...|:......:.||   .|...||.|.           |.:
 Worm   348 EKLHEEMIQRSIDPDTITY--NLLINGFCMHNRLDEAKQMFKFMVSKDCLP-----------NIQ 399

Human   231 SADSMVK-FYTCFPISMDGNQLSISMAPEHVDLKDEEALFTTLIQENDPEANIDK---IYNRFVH 291
            :.::::. |..|..:. ||.:|...|:..  .|......:||:||......:.|.   ::.:.|.
 Worm   400 TYNTLINGFCKCKRVE-DGVELFREMSQR--GLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVS 461

Human   292 LDNLPEDGLQCV-----LCVGHQFGKVDRYMFMSNKNKVILQLESPESALSMYNFLKQ---NPQN 348
             :.:|.|.:...     ||   .:||:|..:.:..    .||....|..:.:||.:.:   ....
 Worm   462 -NRVPTDIMTYSILLHGLC---SYGKLDTALVIFK----YLQKSEMELNIFIYNTMIEGMCKAGK 518

Human   349 IGE-HVLTCTLSPKTD 363
            :|| ..|.|:||.|.|
 Worm   519 VGEAWDLFCSLSIKPD 534

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CROCCNP_055490.4 Smc <76..>672 CDD:440809 68/319 (21%)
Rootletin 156..332 CDD:464459 37/187 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 464..518
Smc <555..>1057 CDD:440809
Smc <816..>1368 CDD:440809
SMC_prok_B 1135..1927 CDD:274008
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1184..1226
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1443..1575
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1962..2017
che-10NP_494819.3 Rootletin <162..282 CDD:464459 9/53 (17%)
PRK02224 <294..797 CDD:179385 60/275 (22%)
SMC_prok_B 568..>1297 CDD:274008
SMC_prok_B 1029..1791 CDD:274008
Blue background indicates that the domain is not in the aligned region.

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