DRSC/TRiP Functional Genomics Resources

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Protein Alignment NUP93 and nup93

DIOPT Version :10

Sequence 1:NP_055484.3 Gene:NUP93 / 9688 HGNCID:28958 Length:819 Species:Homo sapiens
Sequence 2:NP_571056.2 Gene:nup93 / 30172 ZFINID:ZDB-GENE-990415-46 Length:820 Species:Danio rerio


Alignment Length:820 Identity:688/820 - (83%)
Similarity:761/820 - (92%) Gaps:1/820 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     1 MDTEGFGELLQQAEQLAAETEGISELPHVERNLQEIQQAGERLRSRTLTRTSQETADVKASVLLG 65
            |||||||||||||||||||||.:||||||||||||||||||||||||||||||:|||||||:|||
Zfish     1 MDTEGFGELLQQAEQLAAETEAVSELPHVERNLQEIQQAGERLRSRTLTRTSQDTADVKASILLG 65

Human    66 SRGLDISHISQRLESLSAATTFEPLEPVKDTDIQGFLKNEKDNALLSAIEESRKRTFGMAEEYHR 130
            ||||||.|||||||||||||||||||||||||||||||||:||||||||||||:|||.:||||||
Zfish    66 SRGLDIFHISQRLESLSAATTFEPLEPVKDTDIQGFLKNERDNALLSAIEESRRRTFLLAEEYHR 130

Human   131 ESMLVEWEQVKQRILHTLLASGEDALDFTQESEPSYISDVGPPGRSSLDNIEMAYARQIYIYNEK 195
            :||||:|||||||:|||||.:|||||||:||.|||::|:||.||||:||::|:||:||||::|||
Zfish   131 DSMLVQWEQVKQRVLHTLLGAGEDALDFSQEVEPSFVSEVGVPGRSALDSVEVAYSRQIYVFNEK 195

Human   196 IVNGHLQPNLVDLCASVAE-LDDKSISDMWTMVKQMTDVLLTPATDALKNRSSVEVRMEFVRQAL 259
            ||||||||||.|||||||| ||||::|:||.||||||||||.||.|.||:|.||:::|.||||||
Zfish   196 IVNGHLQPNLGDLCASVAESLDDKNVSEMWLMVKQMTDVLLVPAKDTLKSRVSVDMQMAFVRQAL 260

Human   260 AYLEQSYKNYTLVTVFGNLHQAQLGGVPGTYQLVRSFLNIKLPAPLPGLQDGEVEGHPVWALIYY 324
            .:||.|||||||||||||||||||||||||||||.||||||||.||||.|||||||||||||||:
Zfish   261 QFLENSYKNYTLVTVFGNLHQAQLGGVPGTYQLVCSFLNIKLPTPLPGRQDGEVEGHPVWALIYF 325

Human   325 CMRCGDLLAASQVVNRAQHQLGEFKTWFQEYMNSKDRRLSPATENKLRLHYRRALRNNTDPYKRA 389
            |:|||||.||.||||:||||||:||.||||||||.||||||||||||||||||.|||:.||||||
Zfish   326 CLRCGDLSAAMQVVNKAQHQLGDFKIWFQEYMNSPDRRLSPATENKLRLHYRRVLRNSADPYKRA 390

Human   390 VYCIIGRCDVTDNQSEVADKTEDYLWLKLNQVCFDDDGTSSPQDRLTLSQFQKQLLEDYGESHFT 454
            |||:||:||:.||..||||||||||||||||||||:||:||||||:||:|.|||||||||||||:
Zfish   391 VYCLIGKCDIGDNHGEVADKTEDYLWLKLNQVCFDEDGSSSPQDRMTLAQLQKQLLEDYGESHFS 455

Human   455 VNQQPFLYFQVLFLTAQFEAAVAFLFRMERLRCHAVHVALVLFELKLLLKSSGQSAQLLSHEPGD 519
            .:.||||||||||||||||||:|||||:||||.|||||||||:|||||||||||||||||.|.||
Zfish   456 ASHQPFLYFQVLFLTAQFEAAIAFLFRVERLRSHAVHVALVLYELKLLLKSSGQSAQLLSQEAGD 520

Human   520 PPCLRRLNFVRLLMLYTRKFESTDPREALQYFYFLRDEKDSQGENMFLRCVSELVIESREFDMIL 584
            ||.:|||||:||||||||||||||||||||||||||:||||||||||:|||||||||||||||:|
Zfish   521 PPMVRRLNFIRLLMLYTRKFESTDPREALQYFYFLRNEKDSQGENMFMRCVSELVIESREFDMLL 585

Human   585 GKLENDGSRKPGVIDKFTSDTKPIINKVASVAENKGLFEEAAKLYDLAKNADKVLELMNKLLSPV 649
            |:||.||||||||||||..||:.||.||||.||||||||||.|||:|||||||||||||||||||
Zfish   586 GRLEKDGSRKPGVIDKFAGDTRAIITKVASEAENKGLFEEAVKLYELAKNADKVLELMNKLLSPV 650

Human   650 VPQISAPQSNKERLKNMALSIAERYRAQGISANKFVDSTFYLLLDLITFFDEYHSGHIDRAFDII 714
            :.|:|.||||||||||||::|||||||.|::..|.||:||||||||:|||||||:||||||:|:|
Zfish   651 IAQVSEPQSNKERLKNMAVAIAERYRANGVAGEKSVDNTFYLLLDLMTFFDEYHAGHIDRAYDVI 715

Human   715 ERLKLVPLNQESVEERVAAFRNFSDEIRHNLSEVLLATMNILFTQFKRLKGTSPSSSSRPQRVIE 779
            ||||||||:|:|||||||||||||||:||||||||||||||||||:|||||.:..:..||||.:|
Zfish   716 ERLKLVPLSQDSVEERVAAFRNFSDEVRHNLSEVLLATMNILFTQYKRLKGAAAGTPGRPQRTLE 780

Human   780 DRDSQLRSQARTLITFAGMIPYRTSGDTNARLVQMEVLMN 819
            |||..||.|||.|||||||||||.:|||||||||||||||
Zfish   781 DRDMLLRIQARALITFAGMIPYRMAGDTNARLVQMEVLMN 820

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NUP93NP_055484.3 Nic96 218..810 CDD:461172 488/591 (83%)
nup93NP_571056.2 Nic96 219..811 CDD:461172 488/591 (83%)

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