DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SNCAIP and Sncaip

DIOPT Version :10

Sequence 1:NP_001295029.1 Gene:SNCAIP / 9627 HGNCID:11139 Length:1016 Species:Homo sapiens
Sequence 2:NP_001186080.1 Gene:Sncaip / 67847 MGIID:1915097 Length:965 Species:Mus musculus


Alignment Length:1017 Identity:827/1017 - (81%)
Similarity:878/1017 - (86%) Gaps:53/1017 - (5%)


- Green bases have known domain annotations that are detailed below.


Human     1 MEAPEYLDLDEIDFSDDISDNRSQGNRLQKLGLEDTDREDAMGFGSHRAKLTVVAALGACHCPEN 65
            |||||||||||||||||||                                              
Mouse     1 MEAPEYLDLDEIDFSDDIS---------------------------------------------- 19

Human    66 EYSVTSLKTIPELCRRCDTQNEDRSVSSSSWNCGISTLITNTQKPTGIADVYSKFRPVKRVSPLK 130
             ||||||||||.||||||:||||||||||.||||:||||||.|||||||||||||||||||||||
Mouse    20 -YSVTSLKTIPALCRRCDSQNEDRSVSSSGWNCGVSTLITNPQKPTGIADVYSKFRPVKRVSPLK 83

Human   131 HQPETLENNESDDQKNQKVVEYQKGGESDLGPQPQELGPGDGVGGPPGKSSEPSTSLGELEHYDL 195
            ||||||||||::|||| ..||||||||:|.||||:||.|.|||||.|||.||||.:|||||||||
Mouse    84 HQPETLENNENEDQKN-NTVEYQKGGETDQGPQPEELSPEDGVGGLPGKGSEPSQALGELEHYDL 147

Human   196 DMDEILDVPYIKSSQQLASFTKVTSEKRILGLCTTINGLSGKACSTGSSESSSSNMAPFCVLSPV 260
            ||||||||||||||||||..||||||||||||||||||||.|.|...|:|:|:.||.||||||||
Mouse   148 DMDEILDVPYIKSSQQLAPLTKVTSEKRILGLCTTINGLSAKTCPIASTENSTPNMTPFCVLSPV 212

Human   261 KSPHLRKASAVIHDQHKLSTEETEISPPLVKCGSAYEPENQSKDFLNKTFSDPHGRKVEKTTPDC 325
            ||||||||...:.||||||||::|.||.|.|||.|||.||.|||||||.|||||.||:||:.|||
Mouse   213 KSPHLRKAPTALRDQHKLSTEDSESSPALGKCGPAYESENHSKDFLNKVFSDPHSRKIEKSGPDC 277

Human   326 QLRAFHLQSSAAESKPEEQVSGLNRTSSQGPEERSEYLKKVKSILNIVKEGQISLLPHLAADNLD 390
            :||:||||||||.:|.||.::|:|.|::||.|||:||||||:||||||.||||||||||||||||
Mouse   278 KLRSFHLQSSAAGAKTEEPINGMNWTNTQGTEERTEYLKKVRSILNIVNEGQISLLPHLAADNLD 342

Human   391 KIHDENGNNLLHIAASQGHAECLQHLTSLMGEDCLNERNTEKLTPAGLAIKNGQLECVRWMVSET 455
            ||||||||||||||||:||||||||||||||||||||||||:|||||||||||||||||||||||
Mouse   343 KIHDENGNNLLHIAASKGHAECLQHLTSLMGEDCLNERNTEQLTPAGLAIKNGQLECVRWMVSET 407

Human   456 EAIAELSCSKDFPSLIHYAGCYGQEKILLWLLQFMQEQGISLDEVDQDGNSAVHVASQHGYLGCI 520
            ||||||||||||||||||||||||||||||||||||||||||||||::|||||||||||||||||
Mouse   408 EAIAELSCSKDFPSLIHYAGCYGQEKILLWLLQFMQEQGISLDEVDREGNSAVHVASQHGYLGCI 472

Human   521 QTLVEYGANVTMQNHAGEKPSQSAERQGHTLCSRYLVVVETCMSLASQVVKLTKQLKEQTVERVT 585
            ||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||
Mouse   473 QTLVEYGANVTMQNHAGEKPSQSAERHGHTLCSRYLVVVETCMSLASQVVKLTKQLKEQTVERVT 537

Human   586 LQNQLQQFLEAQKSEGKSLPSSPSSPSSPASRKSQWKSPDADDDSVAKSKPGVQEGIQVLGSLSA 650
            ||:||||.|||||||||||||||||||||||.|||||:.|.|::|..|||.|.|||||||||||.
Mouse   538 LQSQLQQLLEAQKSEGKSLPSSPSSPSSPASTKSQWKALDTDEESTGKSKVGAQEGIQVLGSLSV 602

Human   651 SSRARPKAKDEDSDKILRQLLGKEISENVCTQEKLSLEFQDAQASSRNSKKIPLEKRELKLARLR 715
            |||||.|.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Mouse   603 SSRARTKGKDEDSDKILRQLLGKEISENVCTQEKLSLEFQDAQASSRNSKKIPLEKRELKLARLR 667

Human   716 QLMQRSLSESDTDSNNSEDPKTTPVRKADRPRPQPIVESVESMDSAESLHLMIKKHTLASGGRRF 780
            |||||||||||||||||||||.|||::||||||||||||||::|||||||||||||:||| ||||
Mouse   668 QLMQRSLSESDTDSNNSEDPKNTPVKRADRPRPQPIVESVENVDSAESLHLMIKKHSLAS-GRRF 731

Human   781 PFSIKASKSLDGHSPSPTSESSEPDLESQYPGSGSIPPNQPSGDPQQPSPDSTAAQKVATSPKSA 845
            ||.:||||||||||||||||||||||:|..||.|..||.|||.:..|.|||||||||||||||||
Mouse   732 PFGMKASKSLDGHSPSPTSESSEPDLDSHGPGLGMTPPTQPSTEATQSSPDSTAAQKVATSPKSA 796

Human   846 LKSPSSKRRTSQNLKLRVTFEEPVVQMEQPSLELNGEKDKDKGRTLQRTSTSNESGDQLKRPFGA 910
            |||||||||||||.|||||||||||||||..|||||||||||||..||||   |||:|:|||||.
Mouse   797 LKSPSSKRRTSQNSKLRVTFEEPVVQMEQTGLELNGEKDKDKGRAPQRTS---ESGEQMKRPFGT 858

Human   911 FRSIMETLSGNQNNNNNYQAANQLKTSTLPLTSLGRKT-DAKGNPASSASKGKNKAEMYSSCINL 974
            ||||||:||||||||||||.|:||||.||||||||||| ||||||.|.||||||||.||||||:|
Mouse   859 FRSIMESLSGNQNNNNNYQPASQLKTCTLPLTSLGRKTADAKGNPVSPASKGKNKAAMYSSCIHL 923

Human   975 SSNMLIEEHLCNDTRHNDINRKMKKSYSIKHIAEPESKELFL 1016
            .||.|:||||.:..|||||.|...|:|.:||.||||.:||||
Mouse   924 PSNALVEEHLRDYARHNDIKRNATKTYHMKHTAEPEPRELFL 965

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SNCAIPNP_001295029.1 ANKYR <369..556 CDD:440430 180/186 (97%)
ANK repeat 396..429 CDD:293786 31/32 (97%)
ANK repeat 431..501 CDD:293786 68/69 (99%)
ANK repeat 503..534 CDD:293786 29/30 (97%)
SNCAIP_SNCA_bd 559..602 CDD:435527 40/42 (95%)
SncaipNP_001186080.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 80..99 16/18 (89%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 104..137 25/32 (78%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 222..249 16/26 (62%)
ANKYR <321..508 CDD:440430 180/186 (97%)
ANK repeat 348..381 CDD:293786 31/32 (97%)
ANK 1 348..379 29/30 (97%)
ANK repeat 383..453 CDD:293786 68/69 (99%)
ANK 2 383..412 27/28 (96%)
ANK 3 418..447 28/28 (100%)
ANK repeat 455..486 CDD:293786 29/30 (97%)
ANK 4 455..484 27/28 (96%)
SNCAIP_SNCA_bd 511..554 CDD:435527 40/42 (95%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 548..590 32/41 (78%)
ANK 5 602..631 25/28 (89%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 667..852 158/188 (84%)

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