DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ABCG1 and Abcg1

DIOPT Version :10

Sequence 1:XP_024307909.1 Gene:ABCG1 / 9619 HGNCID:73 Length:786 Species:Homo sapiens
Sequence 2:NP_033723.1 Gene:Abcg1 / 11307 MGIID:107704 Length:666 Species:Mus musculus


Alignment Length:703 Identity:583/703 - (82%)
Similarity:603/703 - (85%) Gaps:51/703 - (7%)


- Green bases have known domain annotations that are detailed below.


Human    88 GTATAVHVQVAALASAKLESSVFVTDCVSCKIENVCDSALQG--KRVPMSGLQGSSIVIMPPSNR 150
            |||.......||:...| ...|.|.:.||..::.|....|.|  |:|..:..:....     |:.
Mouse    11 GTAMNASSYSAAMTEPK-SVCVSVDEVVSSNVDEVETDLLNGHLKKVDNNFTEAQRF-----SSL 69

Human   151 PLKASAASCTWSVQVQGGPHHLGVVAISGKVLSAAHGAGRAYGWGFPGDP--MEEGYKTLLKGIS 213
            |.:|:                   |.|..|.||          :..|..|  .::||||||||||
Mouse    70 PRRAA-------------------VNIEFKDLS----------YSVPEGPWWKKKGYKTLLKGIS 105

Human   214 GKFNSGELVAIMGPSGAGKSTLMNILAGYRETGMKGAVLINGLPRDLRCFRKVSCYIMQDDMLLP 278
            ||||||||||||||||||||||||||||||||||||||||||:||||||||||||||||||||||
Mouse   106 GKFNSGELVAIMGPSGAGKSTLMNILAGYRETGMKGAVLINGMPRDLRCFRKVSCYIMQDDMLLP 170

Human   279 HLTVQEAMMVSAHLKLQEKDEGRREMVKEILTALGLLSCANTRTGSLSGGQRKRLAIALELVNNP 343
            |||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||
Mouse   171 HLTVQEAMMVSAHLKLQEKDEGRREMVKEILTALGLLPCANTRTGSLSGGQRKRLAIALELVNNP 235

Human   344 PVMFFDEPTSGLDSASCFQVVSLMKGLAQGGRSIICTIHQPSAKLFELFDQLYVLSQGQCVYRGK 408
            ||||||||||||||||||||||||||||||||||:||||||||||||||||||||||||||||||
Mouse   236 PVMFFDEPTSGLDSASCFQVVSLMKGLAQGGRSIVCTIHQPSAKLFELFDQLYVLSQGQCVYRGK 300

Human   409 VCNLVPYLRDLGLNCPTYHNPADFVMEVASGEYGDQNSRLVRAVREGMCDSDHKRDLGGDAEVNP 473
            |.||||||||||||||||||||||||||||||||||||||||||||||||:|:|||||||.:|||
Mouse   301 VSNLVPYLRDLGLNCPTYHNPADFVMEVASGEYGDQNSRLVRAVREGMCDADYKRDLGGDTDVNP 365

Human   474 FLWHRPSEEVKQTKRLKGLRKDSSSMEGCHSFSASCLTQFCILFKRTFLSIMRDSVLTHLRITSH 538
            ||||||:||            ||:|||||||||||||||||||||||||||||||||||||||||
Mouse   366 FLWHRPAEE------------DSASMEGCHSFSASCLTQFCILFKRTFLSIMRDSVLTHLRITSH 418

Human   539 IGIGLLIGLLYLGIGNEAKKVLSNSGFLFFSMLFLMFAALMPTVLTFPLEMGVFLREHLNYWYSL 603
            |||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||
Mouse   419 IGIGLLIGLLYLGIGNEAKKVLSNSGFLFFSMLFLMFAALMPTVLTFPLEMSVFLREHLNYWYSL 483

Human   604 KAYYLAKTMADVPFQIMFPVAYCSIVYWMTSQPSDAVRFVLFAALGTMTSLVAQSLGLLIGAAST 668
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Mouse   484 KAYYLAKTMADVPFQIMFPVAYCSIVYWMTSQPSDAVRFVLFAALGTMTSLVAQSLGLLIGAAST 548

Human   669 SLQVATFVGPVTAIPVLLFSGFFVSFDTIPTYLQWMSYISYVRYGFEGVILSIYGLDREDLHCDI 733
            ||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||
Mouse   549 SLQVATFVGPVTAIPVLLFSGFFVSFDTIPAYLQWMSYISYVRYGFEGVILSIYGLDREDLHCDI 613

Human   734 DETCHFQKSEAILRELDVENAKLYLDFIVLGIFFISLRLIAYFVLRYKIRAER 786
            .||||||||||||||||||||||||||||||||||||||||||||||||||||
Mouse   614 AETCHFQKSEAILRELDVENAKLYLDFIVLGIFFISLRLIAYFVLRYKIRAER 666

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ABCG1XP_024307909.1 3a01204 202..786 CDD:273361 556/583 (95%)
Abcg1NP_033723.1 3a01204 60..666 CDD:273361 566/651 (87%)

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