Sequence 1: | XP_011523806.1 | Gene: | TRAF4 / 9618 | HGNCID: | 12034 | Length: | 477 | Species: | Homo sapiens |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_477416.1 | Gene: | Traf4 / 33638 | FlyBaseID: | FBgn0026319 | Length: | 486 | Species: | Drosophila melanogaster |
Alignment Length: | 406 | Identity: | 183/406 - (45%) |
---|---|---|---|
Similarity: | 261/406 - (64%) | Gaps: | 11/406 - (2%) |
- Green bases have known domain annotations that are detailed below.
Human 73 IYPDPELEVQVLGLPIRCIHSEEGCRWSGPLRHLQGHLNTCSFNVIPCPNRCPMKLSRRDLPAHL 137
Human 138 QHDCPKRRLKCEFCGCDFSGEAYESHEGMCPQESVYCENKCGARMMRRLLAQHATSECPKRTQPC 202
Human 203 TYCTKEFVFDTIQSHQYQCPRLPVACPNQCGVGTVAREDLPGHLKDSCNTALVLCPFKDSGCKHR 267
Human 268 CPKLAMARHVEESVKPHLAMMCALVSRQRQELQELRRELEELSVGSDGVLIWKIGSYGRRLQEAK 332
Human 333 AKPNLECFSPAFYTHKYGYKLQVSAFLNGNGSGEGTHLSLYIRVLPGAFDNLLEWPFARRVTFSL 397
Human 398 LDQSDPGLAKPQ-HVTETFHPDPNWKNFQKPGTWRGSLDESSLGFGYPKFISHQDIRKRNYVRDD 461
Human 462 AVFIRAAVELPRKILS 477 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
TRAF4 | XP_011523806.1 | RING | 18..55 | CDD:238093 | |
zf-TRAF | 109..163 | CDD:280357 | 23/53 (43%) | ||
zf-TRAF | 217..276 | CDD:280357 | 24/58 (41%) | ||
MATH_TRAF4 | 315..470 | CDD:239750 | 77/155 (50%) | ||
Traf4 | NP_477416.1 | PLN03086 | <109..206 | CDD:178635 | 45/96 (47%) |
zf-TRAF | 233..292 | CDD:424248 | 24/58 (41%) | ||
MATH_TRAF4 | 331..479 | CDD:239750 | 77/155 (50%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C165160148 | |
Domainoid | 1 | 1.000 | 192 | 1.000 | Domainoid score | I3228 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H3173 | |
Inparanoid | 1 | 1.050 | 398 | 1.000 | Inparanoid score | I1957 |
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 1 | 1.010 | - | - | QHG48494 | |
OrthoDB | 1 | 1.010 | - | - | D391991at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0004698 | |
OrthoInspector | 1 | 1.000 | - | - | oto89226 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_100533 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR10131 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R3301 |
SonicParanoid | 1 | 1.000 | - | - | X4401 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
15 | 14.940 |