DRSC/TRiP Functional Genomics Resources

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Protein Alignment KIF20B and pav

DIOPT Version :9

Sequence 1:NP_001271188.1 Gene:KIF20B / 9585 HGNCID:7212 Length:1820 Species:Homo sapiens
Sequence 2:NP_477025.1 Gene:pav / 38515 FlyBaseID:FBgn0011692 Length:887 Species:Drosophila melanogaster


Alignment Length:1062 Identity:262/1062 - (24%)
Similarity:444/1062 - (41%) Gaps:290/1062 - (27%)


- Green bases have known domain annotations that are detailed below.


Human    52 SFESKDYLQVCLRIRPFTQSEKELESEGCVHILDSQTVVLKEPQCILGRLSEKSSGQMAQKFSFS 116
            |.:::|.:.|..|:||. ||:.:|.|   :.:.:|.|:.|.....:|......:..|...::.|.
  Fly    30 SDKARDPVNVFCRVRPL-QSDADLTS---LRVKNSTTIALNPQDQLLQHHKPHNGAQREVQYIFK 90

Human   117 KVFGPATTQKEFFQGCIMQP-VKDLLKGQSRLIFTYGLTNSGKTYTFQGTEENIGILPRTLNVLF 180
            .||.|..||::.: ..:.|| |::||||::.|:||||:|.||||||..|...:.||:||.|:|||
  Fly    91 HVFQPDATQQDVY-AAVAQPLVENLLKGRNSLLFTYGVTGSGKTYTMTGNLRHRGIMPRCLDVLF 154

Human   181 DSLQERLYTKMNLKPHRSREYLRLSSEQEKEEIASKSALLRQIKEVTV-----------HNDSDD 234
            .::.:....|...||.:...:..||.|         .|||.:..|:..           |.|||.
  Fly   155 RTISDYQAKKFVFKPDKLNGFEILSEE---------DALLERQHEMNQRFAGSGRFAFRHKDSDP 210

Human   235 TLYGSLTNSLNISEFEESIKDYEQANLNMANSIKFSVWVSFFEIYNEYIYDLFVPVSSKFQK--- 296
            .:..           :.|::......|:..|  .:||:|::.||||..:|||.  ..|..||   
  Fly   211 EIAS-----------QASVEPIPLLGLDEDN--MYSVFVTYIEIYNNSVYDLL--EDSGIQKTLQ 260

Human   297 RKMLRLSQDVKGYSFIKDLQWIQVSDSKEAYRLLKLGIKHQSVAFTKLNNASSRSHSIFTVKILQ 361
            .|::|  :|...:.|:..:..::|...::|..:.::|.|.:.:..|.||..||||||:|.::::|
  Fly   261 SKIIR--EDANRHMFVHGVTEVEVKTVEDALEVFQMGQKRKRMGHTVLNAESSRSHSVFNIRLVQ 323

Human   362 I-EDSEMSRVIR------VSELSLCDLAGSERTMKTQNEGERLRETGNINTSLLTLGKCINVLKN 419
            . .||:...|::      ||:|||.|||||||:.:|:|.|.||||.||||.||:||..|:..|:.
  Fly   324 APTDSQGENVVQDRQNITVSQLSLVDLAGSERSSRTKNTGVRLREAGNINNSLMTLRTCLEYLRE 388

Human   420 SEKSKFQ----QHVPFRESKLTHYFQSFFNGKGKICMIVNISQCYLAYDETLNVLKFSAIAQKVC 480
            ::.:...    :.||:|:||:||.|:::|:|:|::.|||.|:.....|||.:.|:||:.:.|:| 
  Fly   389 NQLAASNGLAPKKVPYRDSKITHMFKNYFDGEGQVSMIVCINPRIEDYDENMQVMKFAEMTQEV- 452

Human   481 VPDTLNSSQEKLFGPVKSSQDVSLDSNSNSKILNVKRATISWENSLEDLMEDEDLVEELENAEET 545
                                             .:.|||                          
  Fly   453 ---------------------------------QIARAT-------------------------- 458

Human   546 QNVETKLLDEDLDKTLEENKAFISHEEKRKLLDL-IEDLKKKLINEKKEKLTLEFKIREEVTQEF 609
                  .:.:||..|....||       .||..: :.:|.:..|.|.|: |.::..:...:..:|
  Fly   459 ------PMKQDLGLTPGRRKA-------NKLFKIAVNNLNELGIPEAKD-LEVDVGLVYSLGPDF 509

Human   610 TQYWAQREADFKETLLQEREI---LEENAERRLAIFKDLVGKCDTREEAAKDICATKVETEETHN 671
            ..|    |.|..|..::.||:   ||:..|:|..:..:|..|||:                    
  Fly   510 PAY----EMDSPEAQIKIRELMHYLEQRIEKRKKLRANLDIKCDS-------------------- 550

Human   672 YVGFEDIIDSL-QDNVADIKKQAEIAHLYIASLPDPQEATACLELKFNQIKAELAKTKGELIKTK 735
               |..::.:| :||:                                |::.|||..|.      
  Fly   551 ---FRQMLMNLDRDNL--------------------------------QLRTELASLKA------ 574

Human   736 EELKKRENESDSLIQELETSNKKIITQNQRIKELINIIDQKEDTINEFQNLKSHMENTFKCNDKA 800
              :.|:|.:..:.::      ||:......|..|.|.:.::|..|.|.         |||.|:| 
  Fly   575 --VYKQERDRSAALE------KKVRIHESSIDVLNNTLSKQERQIEEL---------TFKLNEK- 621

Human   801 DTSSLIINNKLICNETVEVPKDSK---SKICSER-KRVNENELQQDEPPAKKGSIHVSSAITEDQ 861
                    ..::..:..|..|..|   ||:..|. |...|.||:..|...|         :.|..
  Fly   622 --------ENMLTQKEHEKEKQKKKFSSKLAVESDKNKREFELKLREQRVK---------LQERM 669

Human   862 K-KSEEVR--PNIAEIEDIRVLQENNEGLRAFLLTIENELKNEKEEKAELNKQIVHFQQELSLSE 923
            : |.|::|  .||.:.||:..|..:...        ||.| |||:..|...:           :|
  Fly   670 RIKDEKLRLVSNILQSEDLPSLPRSQSS--------ENIL-NEKDRGAYTAR-----------TE 714

Human   924 KKNLTLSKEVQQIQSNYDIAIAELHVQKSKNQEQEEKIMKLSNEIETATRSITNNVSQIKLMH-- 986
            :.::..::........:..|.|....::|::...:....:.:|.:...|      :.|..|.:  
  Fly   715 ESSVPATRTDIYATPRHGAAAANNRHRRSRSAGDKWLEHRAANPVPLGT------IMQPYLKNRK 773

Human   987 --TKIDELRTLDS--------VSQISNIDLLNLRDLSNGSEEDNLPNT---QLDLLGNDYLVSKQ 1038
              ||:.:|:.|.:        |||.::.|    .|:.....:.|:..|   ...::.||....||
  Fly   774 SVTKLTDLKELTAHGTTKYCLVSQDADTD----GDVETKLYKGNVIPTCGGGAQVVFNDVECLKQ 834

Human  1039 VKEYRIQEPNRENSFHSSIEAI 1060
              :..:..|.|:...:.:|.|:
  Fly   835 --KSPVHSPTRKRPSNGNISAL 854

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KIF20BNP_001271188.1 KISc_KIF23_like 57..477 CDD:276819 150/445 (34%)
Kinesin 64..479 CDD:278646 149/440 (34%)
Smc 629..1455 CDD:224117 88/458 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 829..866 9/38 (24%)
Necessary and sufficient for interaction with SHTN1. /evidence=ECO:0000250|UniProtKB:Q80WE4 1050..1107 2/11 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1247..1275
DUF342 <1268..1357 CDD:302792
Interaction with PIN1. /evidence=ECO:0000269|PubMed:11470801 1560..1820
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1760..1781
pavNP_477025.1 KISc_KIF23_like 35..450 CDD:276819 150/445 (34%)
Kinesin 42..452 CDD:278646 149/440 (34%)
MKLP1_Arf_bdg 735..837 CDD:293148 21/113 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0247
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D314538at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R641
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
43.850

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