| Sequence 1: | NP_909122.1 | Gene: | RBM39 / 9584 | HGNCID: | 15923 | Length: | 530 | Species: | Homo sapiens |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_006235393.1 | Gene: | Rbm39 / 362251 | RGDID: | 1310071 | Length: | 530 | Species: | Rattus norvegicus |
| Alignment Length: | 530 | Identity: | 529/530 - (99%) |
|---|---|---|---|
| Similarity: | 530/530 - (100%) | Gaps: | 0/530 - (0%) |
- Green bases have known domain annotations that are detailed below.
|
Human 1 MADDIDIEAMLEAPYKKDENKLSSANGHEERSKKRKKSKSRSRSHERKRSKSKERKRSRDRERKK 65
Human 66 SKSRERKRSRSKERRRSRSRSRDRRFRGRYRSPYSGPKFNSAIRGKIGLPHSIKLSRRRSRSKSP 130
Human 131 FRKDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKG 195
Human 196 IAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSAGPMRLYVGSLHFN 260
Human 261 ITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGH 325
Human 326 VTERTDASSASSFLDSDELERTGIDLGTTGRLQLMARLAEGTGLQIPPAAQQALQMSGSLAFGAV 390
Human 391 AEFSFVIDLQTRLSQQTEASALAAAASVQPLATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECN 455
Human 456 KHGGVIHIYVDKNSAQGNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLFPDSMT 520
Human 521 ATQLLVPSRR 530 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| RBM39 | NP_909122.1 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1..146 | 143/144 (99%) | |
| SF-CC1 | 46..518 | CDD:273721 | 471/471 (100%) | ||
| Interaction with JUN. /evidence=ECO:0000250|UniProtKB:Q8VH51 | 291..406 | 114/114 (100%) | |||
| Activating domain. /evidence=ECO:0000250|UniProtKB:Q8VH51 | 291..355 | 63/63 (100%) | |||
| Interaction with ESR1 and ESR2. /evidence=ECO:0000250|UniProtKB:Q8VH51 | 355..406 | 50/50 (100%) | |||
| Interaction with NCOA6. /evidence=ECO:0000250|UniProtKB:Q8VH51 | 406..530 | 123/123 (100%) | |||
| Rbm39 | XP_006235393.1 | SF-CC1 | 46..518 | CDD:273721 | 471/471 (100%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 1 | 0.930 | - | - | C83693671 | |
| Domainoid | 1 | 1.000 | 303 | 1.000 | Domainoid score | I15348 |
| eggNOG | 1 | 0.900 | - | - | E1_KOG0147 | |
| HGNC | 1 | 1.500 | - | - | ||
| Hieranoid | 1 | 1.000 | - | - | ||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 1 | 1.050 | 1017 | 1.000 | Inparanoid score | I5311 |
| NCBI | 1 | 1.000 | - | - | ||
| OMA | 1 | 1.010 | - | - | QHG51929 | |
| OrthoDB | 1 | 1.010 | - | - | D131850at9347 | |
| OrthoFinder | 1 | 1.000 | - | - | FOG0002599 | |
| OrthoInspector | 1 | 1.000 | - | - | oto136687 | |
| orthoMCL | 1 | 0.900 | - | - | OOG6_101917 | |
| Panther | 1 | 1.100 | - | - | LDO | PTHR23139 |
| Phylome | 1 | 0.910 | - | - | ||
| SonicParanoid | 1 | 1.000 | - | - | X1707 | |
| SwiftOrtho | 1 | 1.000 | - | - | ||
| TreeFam | 1 | 0.960 | - | - | ||
| 17 | 17.270 | |||||