DRSC/TRiP Functional Genomics Resources

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Protein Alignment GTPBP1 and cgp-1

DIOPT Version :10

Sequence 1:XP_016884589.1 Gene:GTPBP1 / 9567 HGNCID:4669 Length:726 Species:Homo sapiens
Sequence 2:NP_503137.1 Gene:cgp-1 / 178540 WormBaseID:WBGene00000480 Length:613 Species:Caenorhabditis elegans


Alignment Length:622 Identity:322/622 - (51%)
Similarity:421/622 - (67%) Gaps:37/622 - (5%)


- Green bases have known domain annotations that are detailed below.


Human    30 RAAAAAARLHGGFDSDCSEDGEALNGEPELDLTSKLVLVSPTSEQYDSLLRQMWERMDEGCGETI 94
            :.|.....|:...:.|.||..:...|     |.::.:|.| |.|..:..:..:.:::.||.||.:
 Worm     9 KKATNLCELYADGNDDDSEKEQQDRG-----LDAQFLLRS-TPEDVEKYMIHVRKQLMEGEGECL 67

Human    95 YVIG----QGSDGTEYGLSEADMEASYATVKSMAEQIEA-DVILLRERQEAGGRV--RDYLVRKR 152
            ..:|    ..|...:.||||.|::.:......:.|:|.| ...::|.:|..||.:  ..:::|..
 Worm    68 VELGAPINSNSKNPKSGLSEEDLDKAADAQLKILEKIPAVGTKVIRRKQTGGGSLFTEVWIIRDP 132

Human   153 VGDNDFLEVRVAVVGNVDAGKSTLLGVLTHGELDNGRGFARQKLFRHKHEIESGRTSSVGNDILG 217
            ..:.||:|.|||||||||||||||||||||..||:|||.||.||||||||.||||||||||||||
 Worm   133 PTEKDFIEARVAVVGNVDAGKSTLLGVLTHSALDDGRGAARTKLFRHKHEFESGRTSSVGNDILG 197

Human   218 FDSEGNVVNKPDSHGGSLEWTKICEKSTKVITFIDLAGHEKYLKTTVFGMTGHLPDFCMLMVGSN 282
            ||..||:|||||.|..:|:|.:|.....|::|||||||||||||||:||||||:||:.|||:|:|
 Worm   198 FDVHGNIVNKPDPHNHNLDWVQIGSDCAKLVTFIDLAGHEKYLKTTIFGMTGHMPDYTMLMIGAN 262

Human   283 AGIVGMTKEHLGLALALNVPVFVVVTKIDMCPANILQETLKLLQRLLKSPGCRKIPVLVQSKDDV 347
            .||:|.|||||.|||:|:|||::|||||||||||||:||:|.:.||::|  .:|:|:||::.|||
 Worm   263 MGIIGTTKEHLSLALSLHVPVYLVVTKIDMCPANILEETMKNITRLVRS--AKKLPILVRNMDDV 325

Human   348 IVTASNFSSERMCPIFQISNVTGENLDLLKMFLNLLSPRTSYREEEPAEFQIDDTYSVPGVGTVV 412
            :..|.||.|:::|||||:|||.|.||.||:.|||::..|....|.:||.|||||.|.|.||||:.
 Worm   326 VHAAVNFPSKKVCPIFQVSNVEGTNLPLLRQFLNIVPLRRQLNENDPAHFQIDDIYWVDGVGTIA 390

Human   413 SGTTLRGLIKLNDTLLLGPDPLGNFLSIAVKSIHRKRMPVKEVRGGQTASFALKKIKRSSIRKGM 477
            |||.|.|.|:|||.|||||...|:|:.|.:||||||||||..|:.||:||||||||.:..:||||
 Worm   391 SGTLLSGTIRLNDILLLGPTSNGDFMPIPIKSIHRKRMPVGIVKCGQSASFALKKIPKKDVRKGM 455

Human   478 VMVSPRLNPQASWEFEAEILVLHHPTTISPRYQAMVHCGSIRQTATILSMDKDCLRTGDKATVHF 542
            |:|.|::.|.||..||||||||||||||.|.||||:|.||:|||||::||.|:.|||||:..|.|
 Worm   456 VLVDPKVKPVASMVFEAEILVLHHPTTIKPNYQAMLHIGSVRQTATLVSMGKEVLRTGDRDKVQF 520

Human   543 RFIKTPEYLHIDQRLVFREGRTKAVGTITKLLQTTNNSPMNSKPQQIKMQSTKKGPLTKRDEGGP 607
            :||:.|||:....::||||||||||||::.::      |..|..||...|  |.|  .::..|..
 Worm   521 KFIRQPEYIRPGTKMVFREGRTKAVGTVSSVV------PQESLAQQRAKQ--KDG--RQKQYGKK 575

Human   608 SGGPAVGAPPPGD---------EASSVGAGQPAASSN 635
            |.||   .||.|.         :|.|:.....|||::
 Worm   576 SMGP---KPPNGKPKEKIEKKLDALSIEQLTSAASTS 609

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GTPBP1XP_016884589.1 GTPBP1 77..574 CDD:444076 292/503 (58%)
cgp-1NP_503137.1 GTPBP1 56..553 CDD:444076 292/504 (58%)

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