DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment VPS26A and vps26a

DIOPT Version :10

Sequence 1:NP_004887.2 Gene:VPS26A / 9559 HGNCID:12711 Length:327 Species:Homo sapiens
Sequence 2:NP_957201.1 Gene:vps26a / 393881 ZFINID:ZDB-GENE-040426-1108 Length:327 Species:Danio rerio


Alignment Length:329 Identity:295/329 - (89%)
Similarity:314/329 - (95%) Gaps:4/329 - (1%)


- Green bases have known domain annotations that are detailed below.


Human     1 MSFLGGFFGPICEIDIVLNDGETRKMAEMKTEDGKVEKHYLFYDGESVSGKVNLAFKQPGKRLEH 65
            ||||||.|||.||||::|||.|:||.||:|||:||:|||||||||||||||||:..||..|||||
Zfish     1 MSFLGGLFGPACEIDVILNDAESRKTAELKTEEGKLEKHYLFYDGESVSGKVNINVKQTSKRLEH 65

Human    66 QGIRIEFVGQIELFNDKSNTHEFVNLVKELALPGELTQSRSYDFEFMQVEKPYESYIGANVRLRY 130
            ||||||||||||||:|||||||||||||||||||||||:|||||||||||||||||:||||||||
Zfish    66 QGIRIEFVGQIELFSDKSNTHEFVNLVKELALPGELTQNRSYDFEFMQVEKPYESYVGANVRLRY 130

Human   131 FLKVTIVRRLTDLVKEYDLIVHQLATYPDVNNSIKMEVGIEDCLHIEFEYNKSKYHLKDVIVGKI 195
            ||||||||||:||||||||||||||||||||||||||||||||||||||||||||||||||||||
Zfish   131 FLKVTIVRRLSDLVKEYDLIVHQLATYPDVNNSIKMEVGIEDCLHIEFEYNKSKYHLKDVIVGKI 195

Human   196 YFLLVRIKIQHMELQLIKKEITGIGPSTTTETETIAKYEIMDGAPVKGESIPIRLFLAGYDPTPT 260
            ||||||||||||||||||||:|||||||||||||:||||||:|||||||||||||||||||.|||
Zfish   196 YFLLVRIKIQHMELQLIKKEMTGIGPSTTTETETVAKYEIMEGAPVKGESIPIRLFLAGYDLTPT 260

Human   261 MRDVNKKFSVRYFLNLVLVDEEDRRYFKQQEIILWRKAPEKLRKQRTNFHQRFESPESQ--ASAE 323
            ||||||||||||||||||||||||||||||||:||||||||:||:  |||||:||||.:  .|||
Zfish   261 MRDVNKKFSVRYFLNLVLVDEEDRRYFKQQEIVLWRKAPEKMRKR--NFHQRYESPEPRPSLSAE 323

Human   324 QPEM 327
            ||||
Zfish   324 QPEM 327

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VPS26ANP_004887.2 Vps26 8..283 CDD:397622 252/274 (92%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 306..327 14/22 (64%)
vps26aNP_957201.1 Vps26 8..283 CDD:397622 252/274 (92%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 305..327 14/23 (61%)

Return to query results.
Submit another query.