| Sequence 1: | NP_004275.4 | Gene: | CHD1L / 9557 | HGNCID: | 1916 | Length: | 897 | Species: | Homo sapiens |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_956607.1 | Gene: | chd1l / 393283 | ZFINID: | ZDB-GENE-040426-892 | Length: | 1026 | Species: | Danio rerio |
| Alignment Length: | 870 | Identity: | 572/870 - (65%) |
|---|---|---|---|
| Similarity: | 698/870 - (80%) | Gaps: | 7/870 - (0%) |
- Green bases have known domain annotations that are detailed below.
|
Human 27 EAARVQEQDLRQWGLTGIHLRSYQLEGVNWLAQRFHCQNGCILGDEMGLGKTCQTIALFIYLAGR 91
Human 92 LNDEGPFLILCPLSVLSNWKEEMQRFAPGLSCVTYAGDKEERACLQQDLKQESRFHVLLTTYEIC 156
Human 157 LKDASFLKSFPWSVLVVDEAHRLKNQSSLLHKTLSEFSVVFSLLLTGTPIQNSLQELYSLLSFVE 221
Human 222 PDLFSKEEVGDFIQRYQDIEKESESASELHKLLQPFLLRRVKAEVATELPKKTEVVIYHGMSALQ 286
Human 287 KKYYKAILMKDLDAFENETAKKVKLQNILSQLRKCVDHPYLFDGVEPEPFEVGDHLTEASGKLHL 351
Human 352 LDKLLAFLYSGGHRVLLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLAIKNFGQQPIFV 416
Human 417 FLLSTRAGGVGMNLTAADTVIFVDSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGRDTVEEIVYR 481
Human 482 KAASKLQLTNMIIEGGHFTLGAQKPAADADLQLSEILKFGLDKLLASEGSTMDEIDLESILGETK 546
Human 547 DGQWVSDALPAAEGGSRDQE----EGKNHMYLFEGKDYSKEPSKEDRKSFEQLVNLQKTLLEKAS 607
Human 608 QEGRSLRNKGSVLIPGLVEGSTKRKRVLSPEELEDRQKKRQEAAAKRRRLIEEKKRQKEEAEHKK 672
Human 673 KMAWWESNNYQSFCLPSEESEPEDLENGEESSAELDYQDPDATSLKYVSGDVTHPQAGAEDALIV 737
Human 738 HCVDDSGHWGRGGLFTALEKRSAEPRKIYELAGKMKDLSLGGVLLFPVDDKESRNKGQDLLALIV 802
Human 803 AQHRDRSNVLSGIKMAALEEGLKKIFLAAKKKKASVHLPRIGHATKGFNWYGTERLIRKHLAARG 867
Human 868 IPTYIYYFPRSKSAVLHSQSSSSSS 892 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| CHD1L | NP_004275.4 | SNF2_N | 46..699 | CDD:331286 | 428/656 (65%) |
| DEAH box | 174..177 | 2/2 (100%) | |||
| Required for helicase activity. /evidence=ECO:0000269|PubMed:29220653 | 615..673 | 27/57 (47%) | |||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 628..654 | 13/25 (52%) | |||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 687..711 | 8/23 (35%) | |||
| Macro_Poa1p_like_SNF2 | 716..866 | CDD:239447 | 118/149 (79%) | ||
| chd1l | NP_956607.1 | SNF2_N | 38..317 | CDD:278600 | 185/278 (67%) |
| DEXDc | 54..194 | CDD:238005 | 96/139 (69%) | ||
| DEAH box | 163..166 | 2/2 (100%) | |||
| Helicase_C | 335..448 | CDD:278689 | 92/112 (82%) | ||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 606..655 | 24/48 (50%) | |||
| Required for helicase activity. /evidence=ECO:0000250|UniProtKB:Q86WJ1 | 608..666 | 27/57 (47%) | |||
| Macro_Poa1p_like_SNF2 | 709..859 | CDD:239447 | 118/149 (79%) | ||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 877..929 | 3/6 (50%) | |||
| BRCT | <951..1014 | CDD:294035 | |||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 1 | 0.930 | - | - | C194325915 | |
| Domainoid | 1 | 1.000 | 525 | 1.000 | Domainoid score | I2428 |
| eggNOG | 1 | 0.900 | - | - | E2759_KOG0385 | |
| Hieranoid | 1 | 1.000 | - | - | ||
| Homologene | 1 | 1.000 | - | - | H11590 | |
| Inparanoid | 1 | 1.050 | 1159 | 1.000 | Inparanoid score | I1737 |
| NCBI | 1 | 1.000 | - | - | ||
| OMA | 1 | 1.010 | - | - | QHG58371 | |
| OrthoDB | 1 | 1.010 | - | - | D308710at33208 | |
| OrthoFinder | 1 | 1.000 | - | - | FOG0011122 | |
| OrthoInspector | 1 | 1.000 | - | - | oto45978 | |
| orthoMCL | 1 | 0.900 | - | - | OOG6_107910 | |
| Panther | 1 | 1.100 | - | - | LDO | PTHR47157 |
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 1 | 1.000 | - | - | X8709 | |
| SwiftOrtho | 1 | 1.000 | - | - | ||
| TreeFam | 1 | 0.960 | - | - | ||
| ZFIN | 1 | 1.500 | - | - | ||
| 18 | 18.270 | |||||