DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CHD1L and snf21

DIOPT Version :9

Sequence 1:NP_004275.4 Gene:CHD1L / 9557 HGNCID:1916 Length:897 Species:Homo sapiens
Sequence 2:NP_594861.1 Gene:snf21 / 2542638 PomBaseID:SPAC1250.01 Length:1199 Species:Schizosaccharomyces pombe


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CHD1LNP_004275.4 SNF2_N 46..699 CDD:331286
DEAH box 174..177
Required for helicase activity. /evidence=ECO:0000269|PubMed:29220653 615..673
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 628..654
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 687..711
Macro_Poa1p_like_SNF2 716..866 CDD:239447
snf21NP_594861.1 HepA 160..894 CDD:223627
HSA 256..328 CDD:214727
DEXDc 437..576 CDD:238005
Helicase_C 735..850 CDD:278689
SnAC 946..1012 CDD:291293
COG5076 <1028..>1197 CDD:227408
Bromo_SNF2 1066..1168 CDD:99950
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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