DRSC/TRiP Functional Genomics Resources

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Protein Alignment GDF15 and gbb

DIOPT Version :10

Sequence 1:NP_004855.2 Gene:GDF15 / 9518 HGNCID:30142 Length:308 Species:Homo sapiens
Sequence 2:NP_477340.1 Gene:gbb / 37778 FlyBaseID:FBgn0024234 Length:455 Species:Drosophila melanogaster


Alignment Length:245 Identity:58/245 - (23%)
Similarity:92/245 - (37%) Gaps:64/245 - (26%)


- Green bases have known domain annotations that are detailed below.


Human    74 EDSNTDLVPAPAVRILTPEVRLGSGGHLHLRISRAALPEGL-----PE--ASRLHRALFRLSPTA 131
            :|::...:.|.||.....||:|...|.:|.::.....|..:     ||  .:..|.:..|...:|
  Fly   263 KDNHGIYIGAHAVNRPDREVKLDDIGLIHRKVDDEFQPFMIGFFRGPELIKATAHSSHHRSKRSA 327

Human   132 SRSWDVTRPLRRQLSLARPQAPALHLRLSPPPSQSDQLLAESSSARPQLELHLRPQAARGRRRAR 196
            |      .|.:|:.|::....|.|.                                        
  Fly   328 S------HPRKRKKSVSPNNVPLLE---------------------------------------- 346

Human   197 ARNGDHCPLGPGRCCRLHTVRASLEDLGWADWVLSPREVQVTMCIGACPSQFRA---ANMHAQIK 258
                   |:...|.|::.|:....:||||.||:::|.......|.|.|.....|   |..||.::
  Fly   347 -------PMESTRSCQMQTLYIDFKDLGWHDWIIAPEGYGAFYCSGECNFPLNAHMNATNHAIVQ 404

Human   259 TSLHRLKPDTVPAPCCVPASYNPM-VLIQKTDTGVSLQTYDDLLAKDCHC 307
            |.:|.|:|..||.|||.|.....: ||....|..|:|:.|.:::.|.|.|
  Fly   405 TLVHLLEPKKVPKPCCAPTRLGALPVLYHLNDENVNLKKYRNMIVKSCGC 454

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GDF15NP_004855.2 PRK10929 <23..>147 CDD:236798 18/79 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 152..177 2/24 (8%)
TGF_beta_GDF15 208..307 CDD:381646 35/102 (34%)
gbbNP_477340.1 TGFb_propeptide 45..305 CDD:459906 10/41 (24%)
TGF_beta_BMP5_like 353..455 CDD:381639 35/102 (34%)

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