DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SPTLC2 and Alas

DIOPT Version :10

Sequence 1:NP_004854.1 Gene:SPTLC2 / 9517 HGNCID:11278 Length:562 Species:Homo sapiens
Sequence 2:NP_477281.1 Gene:Alas / 37815 FlyBaseID:FBgn0020764 Length:539 Species:Drosophila melanogaster


Alignment Length:444 Identity:124/444 - (27%)
Similarity:211/444 - (47%) Gaps:51/444 - (11%)


- Green bases have known domain annotations that are detailed below.


Human   118 FENFYTRNLYMRIRDNWNRPICSVPGARVDIMERQSHD--YNWSFKYTGNIIKGVINMGSYNYLG 180
            :|.|:...:..:.||:..|....|        .|.:.|  :..:.:|:....|.:....|.:|||
  Fly    95 YERFFNEQIMKKKRDHSYRVFKKV--------NRLAGDGLFPHALEYSERTEKPITVWCSNDYLG 151

Human   181 FARNTGSCQEAAAKVLEEYGAGVCSTRQEIGNLDKHEELEELVARFLGVEAAMAYGMGFATNSMN 245
            .:.:.| .:.|....|..:|:|...||...||...||.||..:|.....|||:.:...|..|...
  Fly   152 MSAHPG-VKRAVQDALNRHGSGAGGTRNISGNSLHHERLESKLAELHQKEAALLFTSCFVANDST 215

Human   246 IPALVG--KGCLILSDELNHASLVLGARLSGATIRIFKHNNMQSLEKLLKDAIVYGQPRTRRPWK 308
            :..|..  .||.|.||..||||:::|.|.||....||:||::..|.:|||        :|.:...
  Fly   216 LFTLAKLLPGCEIFSDAGNHASMIMGIRNSGVPKHIFRHNDVDHLHQLLK--------QTDKSVP 272

Human   309 KILILVEGIYSMEGSIVRLPEVIALKKKYKAYLYLDEAHSIGALGPTGRGVVEYFGLDPEDVDVM 373
            || :..|.::||.|:|..|.|::.:..::.|..::||.|::|..|..|.||.|..|: ...:|::
  Fly   273 KI-VAFETVHSMTGAICPLEELLDVAHEHGAITFIDEVHAVGLYGDHGAGVGERDGV-LHKMDII 335

Human   374 MGTFTKSFGASGGYIGGKKELIDYLRTHSHSAVYATSLSPPVVEQIITSMKCIMGQDGTSLGKEC 438
            .||..|:||..||||.|...|:|.:|:::...::.|||.|.|:...:.::..:..::|..| :..
  Fly   336 SGTLGKAFGNIGGYIAGTHNLVDMIRSYAAGFIFTTSLPPTVLCGALEAVNILASEEGRQL-RHL 399

Human   439 VQQLAENTRYFRRRLKEMGFIIYGNEDSP--VVPLMLYMPAK--------IGAFGREMLKRNIGV 493
            .|:   |..|.:..||..||.:   |::|  ::|:.:..|.|        |..||..:...|...
  Fly   400 HQR---NVSYLKSLLKREGFPV---EETPSHIIPIKIGDPLKSSQISNVLIEQFGHYLQSINYPT 458

Human   494 VVVGFPATPIIESRARFCLSAAHTKEILDTALKEIDEVGDLLQLKYSRHRLVPL 547
            |..|       :.:.|...:..||.|:::..:.::.:|.:::.|..:    |||
  Fly   459 VARG-------QEKLRLAPTPFHTFEMMNALVTDLKKVWEMVDLSTN----VPL 501

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SPTLC2NP_004854.1 AAT_I 67..542 CDD:450240 121/437 (28%)
AlasNP_477281.1 AAT_I 93..495 CDD:450240 120/432 (28%)

Return to query results.
Submit another query.