DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SPTLC2 and lace

DIOPT Version :9

Sequence 1:NP_004854.1 Gene:SPTLC2 / 9517 HGNCID:11278 Length:562 Species:Homo sapiens
Sequence 2:NP_001285957.1 Gene:lace / 34910 FlyBaseID:FBgn0002524 Length:597 Species:Drosophila melanogaster


Alignment Length:481 Identity:274/481 - (56%)
Similarity:369/481 - (76%) Gaps:8/481 - (1%)


- Green bases have known domain annotations that are detailed below.


Human    62 AFEETPMLVAVLTYVGYGVLTLFGYLRDFLRYWRIEKCHHATEREEQKDFVSLYQDFENFYTRNL 126
            :|||.|:..|.|||:|:.:|.:.||:...|...::     |||: .:..:|:||..||:||:|.:
  Fly   114 SFEEVPLHTACLTYLGFYLLMILGYINQLLFVPKV-----ATEK-GRDGYVALYDAFESFYSRYV 172

Human   127 YMRIRDNWNRPICSVPGARVDIMERQSHDYNWSFKYTGNIIKGVINMGSYNYLGFARNTGSCQEA 191
            |.||:|.||||||||||..:.:.:|.:.||.||||:||...: .:|:|||||||||..||.|.:.
  Fly   173 YRRIKDCWNRPICSVPGDELTLKDRVTDDYGWSFKFTGTETR-CLNLGSYNYLGFAAATGQCADD 236

Human   192 AAKVLEEYGAGVCSTRQEIGNLDKHEELEELVARFLGVEAAMAYGMGFATNSMNIPALVGKGCLI 256
            :.:.....|...||:|.|:|:.::.:|||.|.||:.|||.|:.:|||||||::|:|:|:|...|:
  Fly   237 SEESARSSGLAYCSSRCELGDNEQLQELEALTARYFGVEDAIVFGMGFATNALNLPSLLGPNSLV 301

Human   257 LSDELNHASLVLGARLSGATIRIFKHNNMQSLEKLLKDAIVYGQPRT-RRPWKKILILVEGIYSM 320
            :|||.||||::||.||||||.::||||||:.||::|:..:.||.|:. .:||.|::||||||:||
  Fly   302 ISDEKNHASIILGLRLSGATTKVFKHNNMRDLERVLRQGVCYGNPKKGGQPWDKVMILVEGIFSM 366

Human   321 EGSIVRLPEVIALKKKYKAYLYLDEAHSIGALGPTGRGVVEYFGLDPEDVDVMMGTFTKSFGASG 385
            ||||||||||||||||||||||||||||:||:|..||||.:||.:||::||::|||||||||::|
  Fly   367 EGSIVRLPEVIALKKKYKAYLYLDEAHSVGAMGSRGRGVTDYFNVDPKEVDILMGTFTKSFGSAG 431

Human   386 GYIGGKKELIDYLRTHSHSAVYATSLSPPVVEQIITSMKCIMGQDGTSLGKECVQQLAENTRYFR 450
            ||:.|.|:|||:|||:||:..||.|:|||:.:||:||||.|||:|||.:|::.:.|||.||||||
  Fly   432 GYLAGSKKLIDFLRTNSHAHCYAASISPPIAQQILTSMKTIMGEDGTDIGRKKIHQLARNTRYFR 496

Human   451 RRLKEMGFIIYGNEDSPVVPLMLYMPAKIGAFGREMLKRNIGVVVVGFPATPIIESRARFCLSAA 515
            |||.::|.|.||:|||||||:::|:.:||||..|.:..|:|..|..|||||||:|.|.|||||||
  Fly   497 RRLAQLGVITYGHEDSPVVPMLVYLFSKIGAVVRTLTTRHIAAVGAGFPATPIMEGRIRFCLSAA 561

Human   516 HTKEILDTALKEIDEVGDLLQLKYSR 541
            ||||.||.||:.|||:.|.|.|||||
  Fly   562 HTKEQLDFALEAIDEIADDLGLKYSR 587

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SPTLC2NP_004854.1 AAT_I 67..542 CDD:418510 271/476 (57%)
laceNP_001285957.1 PLN02483 117..587 CDD:178101 270/476 (57%)
BioF 164..577 CDD:223234 247/413 (60%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 465 1.000 Domainoid score I470
eggNOG 1 0.900 - - E1_COG0156
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H21610
Inparanoid 1 1.050 570 1.000 Inparanoid score I1060
Isobase 1 0.950 - 0 Normalized mean entropy S642
OMA 1 1.010 - - QHG53569
OrthoDB 1 1.010 - - D312139at33208
OrthoFinder 1 1.000 - - FOG0001517
OrthoInspector 1 1.000 - - otm40430
orthoMCL 1 0.900 - - OOG6_100700
Panther 1 1.100 - - LDO PTHR13693
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R652
SonicParanoid 1 1.000 - - X956
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1615.820

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