DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment LITAF and CG30195

DIOPT Version :10

Sequence 1:XP_011521056.1 Gene:LITAF / 9516 HGNCID:16841 Length:191 Species:Homo sapiens
Sequence 2:NP_611696.2 Gene:CG30195 / 37592 FlyBaseID:FBgn0050195 Length:153 Species:Drosophila melanogaster


Alignment Length:89 Identity:22/89 - (24%)
Similarity:36/89 - (40%) Gaps:19/89 - (21%)


- Green bases have known domain annotations that are detailed below.


Human   106 VQTVYVQH--PITFL-DRPIQMCCPSCNKMIVSQLSYNAGALTWLSCGSLCLLGCIAGCC-FIPF 166
            :..:.|.|  .:.:| :.|..:.||||.|             :..|...|.|:.|:.... |...
  Fly     8 IVAIIVSHKPQVGYLKEEPTWIRCPSCEK-------------SGTSLVQLELVTCLQRFLGFTKL 59

Human   167 CV--DALQDVDHYCPNCRALLGTY 188
            |.  ...||::|||.:|...:|.:
  Fly    60 CKKWSGRQDINHYCSHCGCFIGRF 83

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LITAFXP_011521056.1 zf-LITAF-like 119..189 CDD:463165 19/73 (26%)
CG30195NP_611696.2 zf-LITAF-like 26..85 CDD:470665 19/71 (27%)

Return to query results.
Submit another query.