DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment LITAF and CG12645

DIOPT Version :10

Sequence 1:XP_011521056.1 Gene:LITAF / 9516 HGNCID:16841 Length:191 Species:Homo sapiens
Sequence 2:NP_001096935.1 Gene:CG12645 / 31947 FlyBaseID:FBgn0030181 Length:206 Species:Drosophila melanogaster


Alignment Length:182 Identity:41/182 - (22%)
Similarity:64/182 - (35%) Gaps:51/182 - (28%)


- Green bases have known domain annotations that are detailed below.


Human    44 SSAPSAPPSYEE-----TVAVNSYYPTP-------------------PAPMPGPTTGLVTGPDGK 84
            |.:||.||:|.:     |:..|..|...                   |.|||...|........:
  Fly    26 SLSPSEPPTYYDAMQTFTIQNNLDYSNDRRRTLFAEPQHLRSRVEEMPMPMPMSQTKDEVSVQSE 90

Human    85 GMNPPSYYTQPAPIPNNNPITVQTV----------YVQHPITFL-DRPIQMCCPSCNKMIVSQL- 137
            |            :.:||.|..:.:          ::..|...| .:.:.:.||:|.:..|::| 
  Fly    91 G------------LADNNSIDHRAMPPVRSKCDDFFILSPQPKLGSQAMDIVCPACGQRGVTRLK 143

Human   138 -SYNAGALTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCPNCRALLGTY 188
             |.||....|..|  ||..|.....|..|:..:..:..:|||..|...||.:
  Fly   144 RSPNARTNLWALC--LCTFGWCCCACLFPYLWNGCRTTNHYCSACEIFLGAH 193

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LITAFXP_011521056.1 zf-LITAF-like 119..189 CDD:463165 21/72 (29%)
CG12645NP_001096935.1 zf-LITAF-like 129..193 CDD:463165 21/65 (32%)

Return to query results.
Submit another query.