DRSC/TRiP Functional Genomics Resources

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Protein Alignment ADAMTS1 and nolo

DIOPT Version :9

Sequence 1:NP_008919.3 Gene:ADAMTS1 / 9510 HGNCID:217 Length:967 Species:Homo sapiens
Sequence 2:NP_001036374.1 Gene:nolo / 35424 FlyBaseID:FBgn0051619 Length:1394 Species:Drosophila melanogaster


Alignment Length:571 Identity:142/571 - (24%)
Similarity:207/571 - (36%) Gaps:187/571 - (32%)


- Green bases have known domain annotations that are detailed below.


Human   433 MLSNLDHSQP--WSPCSAYMITSFLDNGHGECLMD------KPQNPIQLPGDLPGTSYDANRQCQ 489
            |..|::.:.|  |   :|..:|:.       ||:|      |..|..|...|...|:.|...:. 
  Fly     1 MSVNMNWTSPKIW---AALFVTTL-------CLLDTQAAWAKKLNASQAFDDTWNTASDLENEL- 54

Human   490 FTFGEDSKHCPDAASTCSTLWCTGTSGGVLVCQTKHFPWADGTSCGEGKWCINGKCVNKTDRKHF 554
                |..|.        |.:...|..||                .|.|.                
  Fly    55 ----EQQKR--------SKVQSAGGGGG----------------AGGGP---------------- 75

Human   555 DTPFHGSWGMWGPWGDCSRTCGGGVQYTMRECDNPVPKNGGKYCEGKRVRYRSCNLEDCPDNNGK 619
                 |.|..|..|..|||||.||:.:.||.|.:|     |. |.|:..|||.||::.||:.  :
  Fly    76 -----GQWSSWSDWSTCSRTCDGGIMHQMRRCGSP-----GS-CRGESTRYRICNMQPCPEQ--Q 127

Human   620 TFREEQCEAHNEFSKASFGSGPAVEWIPKYAGVSPKDRCKLICQA------------KGIG---- 668
            .||..||.|:|:...    .|...:|.|.|..|.|   |.|.|:.            .|.|    
  Fly   128 DFRSSQCSAYNDVPY----DGTLYKWTPHYDYVEP---CALTCRGHPAHLVEDISRETGDGNAEE 185

Human   669 --------YFFVLQPKVVDGTPCSPDSTSVCVQGQCVKAGCDRIIDSKKKFDKCGVCGGNGSTCK 725
                    ....|..:|.|||.|...|..:|:||:|.:.|||..|.|.||.|.||||||:|::| 
  Fly   186 AEHYDEQSVIVQLSARVQDGTRCRSGSLDMCIQGKCQRVGCDLKIGSTKKIDGCGVCGGDGNSC- 249

Human   726 KISGSVTSAKPGYHDIITIPTGATNIEVKQRNQRGSRNNGSFLAIKAADGTYILNGDYTLSTLEQ 790
                    ::|.:           |.|:...:|         .::....|               
  Fly   250 --------SQPLF-----------NWEMAPMSQ---------CSVTCGSG--------------- 271

Human   791 DIMYKGVVLRYSGSSAALERIRSFSPLKEPLTIQVLTVGNALRPKIKYTYFVKKKKESFNAIPTF 855
               ||                     :..|:....||..:........|...:...|..|.....
  Fly   272 ---YK---------------------MSRPICRNRLTNADVDDTLCSVTNRPEASVEQCNTHSCP 312

Human   856 SAWVIEEWGECSKSCELGWQRRLVECRD----INGQPASECAKEVKPASTRPCADHPCPQWQLGE 916
            ..|:.::|..||:.|..|::.|:|.|.:    |..:.|....:..||.:...|....||.|::.:
  Fly   313 PRWIADDWSTCSRLCGHGYRERMVVCAEESNGIKTRVADIMCRTPKPPTQETCIIEECPHWEVED 377

Human   917 WSSCSKTCGKGYKKRSLKCLSHDGGVLSHESCDPLKKPKHFIDFCTMAECS 967
            |:.||.:||:|.:.|.::|.|.||.:.:  .||||.||.      :|.:||
  Fly   378 WTGCSVSCGQGIQMRGVECKSTDGSLSA--KCDPLTKPG------SMQQCS 420

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ADAMTS1NP_008919.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..27
Pep_M12B_propep 66..166 CDD:279848
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 192..250
Cysteine switch. /evidence=ECO:0000250 196..203
Reprolysin 258..467 CDD:279729 9/41 (22%)
ZnMc_ADAMTS_like 258..463 CDD:239801 6/31 (19%)
ADAM_CR 468..548 CDD:301627 13/79 (16%)
TSP1 562..614 CDD:214559 22/51 (43%)
Spacer 725..849 12/123 (10%)
ADAM_spacer1 725..842 CDD:283607 11/116 (9%)
TSP1 858..910 CDD:214559 14/55 (25%)
TSP1 912..967 CDD:214559 19/54 (35%)
noloNP_001036374.1 TSP1 78..124 CDD:214559 22/51 (43%)
TSP1 546..600 CDD:214559
TSP1 750..807 CDD:214559
IGc2 845..902 CDD:197706
PLAC 1355..1384 CDD:285849
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3538
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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