DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SCARB2 and CG2736

DIOPT Version :9

Sequence 1:NP_005497.1 Gene:SCARB2 / 950 HGNCID:1665 Length:478 Species:Homo sapiens
Sequence 2:NP_611991.1 Gene:CG2736 / 37998 FlyBaseID:FBgn0035090 Length:507 Species:Drosophila melanogaster


Alignment Length:511 Identity:126/511 - (24%)
Similarity:187/511 - (36%) Gaps:121/511 - (23%)


- Green bases have known domain annotations that are detailed below.


Human    12 LSLLLLVTSVTLLVARVFQKAVDQSI---EKKIVLRNGTEAFDSWEKPPLPVYTQFYFFNVTNPE 73
            |.|:|...:|.|.|.   ...||..|   .:.|..|......|||...|...... |.|||||.|
  Fly    11 LCLILACVNVFLFVV---SWGVDYRILVAREHIRFRQEMPTMDSWINSPFGKLKN-YVFNVTNAE 71

Human    74 EILRGETPR--VEEVGPYTYREL-------RNKANIQFGDNGTTISAVSNKAYVFERDQSVGDPK 129
            |...|...|  |:|:||..||.:       ||:.|:::..:       ..:...|..::||..  
  Fly    72 EFRSGRDSRLKVKEIGPIVYRIVGFNDILDRNETNVRYRKH-------RYRVVEFLPEESVAP-- 127

Human   130 IDLIRTLNIPVLTVIEWSQVHFLREIIEAMLKA---------------YQQKLFVTHTVDELLWG 179
                        .|:.|:.......|:.|..|.               ..:.:|||.:|...||.
  Fly   128 ------------DVLNWTITSTNNVILGAATKVKHTAPLAAFGFDAALMMEDIFVTDSVYYFLWE 180

Human   180 YKD---EILSLIHVFRPDISPYFGLFYEKNGTNDGDYVFLTGEDSYL-NFTKIVEWNGKTSL--- 237
            :..   :.||.|...||:::..:....||...    |....|....: ||.:|...||:..:   
  Fly   181 FTRPLLQTLSRISNIRPNVAVLYNALKEKEEV----YTVNIGPKRGIENFFRIETLNGEVIIREQ 241

Human   238 ----DWWITDKC--NMINGTDGDSFHPLITKDEVLYVFPSDFCRSVYITFSDYESVQGLPAFRYK 296
                ..:.::.|  |:....|...|.|.:..|..|.:...:.||.:.:|:...|...||..||| 
  Fly   242 LPHTRQYDSNSCPFNVSGALDNSLFPPFVQPDTPLSIVAIESCRVLPLTYQRQERYNGLDTFRY- 305

Human   297 VPAEILANTSDNAGFCIPE--GNCLGSGVLNVSICK-NGAPIIMSFPHFYQADERFVSAIEGMHP 358
                .|..:......|:..  |..|..|:.:||.|. |.||...|.||||.:...:....||..|
  Fly   306 ----TLLQSHQKPPGCLDTSYGVKLPDGMFDVSQCVINDAPSAFSMPHFYGSSYNWSQHYEGYTP 366

Human   359 NQEDHETFVDINPLTGIILKAAKRFQINIYVKKLDDF------------------VETGDIRTMV 405
            |.||||.::.:.|:|||.:....|||.||.:..|..|                  .|.|.:...|
  Fly   367 NAEDHEPYILLEPVTGIPVTEKYRFQSNIPIPDLRRFSSRLSRFSNMMIPSFWYEFEMGQLPGFV 431

Human   406 FPVMYLNESV--HIDKETASRLKSMINTTLIITNIPYIIMALGVFFGLVFTWLACK 459
            ..:|::|.::  ||.                    ||.:    |.|.::..|...|
  Fly   432 TSLMWINVNIVQHIQ--------------------PYCM----VLFLVLALWSVLK 463

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SCARB2NP_005497.1 CD36 28..455 CDD:307331 118/489 (24%)
Important for interaction with GBA 155..191 12/53 (23%)
CG2736NP_611991.1 CD36 10..462 CDD:279474 125/508 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165148218
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3776
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1106566at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11923
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
65.850

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