DRSC/TRiP Functional Genomics Resources

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Protein Alignment SCARB1 and CG10345

DIOPT Version :10

Sequence 1:NP_001354910.1 Gene:SCARB1 / 949 HGNCID:1664 Length:552 Species:Homo sapiens
Sequence 2:NP_650563.2 Gene:CG10345 / 42017 FlyBaseID:FBgn0027562 Length:552 Species:Drosophila melanogaster


Alignment Length:525 Identity:143/525 - (27%)
Similarity:232/525 - (44%) Gaps:83/525 - (15%)


- Green bases have known domain annotations that are detailed below.


Human    11 AGALGVAGLLCAVLGAVMIVMVP--SLIKQQVLKNVRIDPSSLSFNMWKEIPIPFYLSVYFFDVM 73
            :.|||:..|.   .|:::|:..|  |::..|    :.:.|.:|...:|...|:..|::||.|:..
  Fly    17 SAALGMTLLF---FGSLVIISDPLQSILDTQ----LSLKPGTLLHRLWLLPPLDVYINVYMFNYT 74

Human    74 NPSEILKG--EKPQVRERGPYVYREFRHKSNITFN-NNDTVSFLEYRTFQFQPSKSHGS-ESDYI 134
            |..|...|  .|.|::|.|||||:|.....|:|:| :|:|:::...|.:.|.|.:|.|. :.|.|
  Fly    75 NVDEFTSGRASKLQLQEVGPYVYKEVLSNHNVTYNESNNTITYSPKREYVFAPERSVGDPKIDRI 139

Human   135 VMPNILVLGAAVMMENKPMTLKLIMTLAFTTLGERAFMNRTVGEIMWGYKDPLVNLINKYFPGMF 199
            ..|||.::|...:..:..|...|.::.....|..:..:..:|.:.||||:|.||.|.:::.|...
  Fly   140 RAPNIPLMGVTTLASSLSMFAALGLSAITRQLNSQPMLEMSVHDYMWGYEDHLVELASRFVPNWI 204

Human   200 PFKDKFGLFAEL--NNSDSGLFTVFT-------GVQ--NISRIHLVDKWNGLSKVDFWHSDQ--- 250
            .| ..||:..:|  ..::|.:|.:..       |::  :..|.:.||..||......|..::   
  Fly   205 DF-SSFGIMEKLFREGNESNVFNMNLPEPKDKYGMRMTDAPRGYTVDSINGERGFKGWQYNEETN 268

Human   251 ---CNMINGT-SGQMWPPFMTPESSLEFYSPEACRSMKLMYKESGVFEGIPTYRFVAPKTLF--- 308
               ||.|.|: ...::|..|........|....||.:.:.:..:..|.|:..:.||.....|   
  Fly   269 GTMCNRIWGSHDATLFPLDMDENDEFFLYRRTFCRRLPVKFNRTTTFNGLDAFEFVMEPDSFDSE 333

Human   309 ---ANGSIYPPNEGFCPCLESGIQNVSTCRFSAPLFLSHPHFLNADPVLAEAVTGLHPNQEAHSL 370
               ||.|.|..|.   .||:.|:.|||.|.::.||.:::|||::|||.|.|...||.||....:.
  Fly   334 VDNANSSCYCKNN---RCLKKGVGNVSPCYYNIPLAITYPHFMHADPSLLEPFDGLQPNVSRFTS 395

Human   371 FLDIHPVTGIPM-NCSVKLQLSLYMKSVAGIGQTGKIEPVVLPLLWFAESGAMEGETLHTFYTQL 434
            ...:.|..|.|| ...::||.:..:..|.........|.::|||||.         .|:.....|
  Fly   396 TFVVQPQLGAPMQGTHLRLQANQVVGKVNFNRMMTPFENMILPLLWV---------DLNIDVLCL 451

Human   435 VLMPKVMHYAQ--YVLL----ALGCVLLLVPVICQIRSQVGAGQRAARADSHSLACWGKGASDRT 493
            .|. .::|..:  :.||    |||.:|..|..:|                |..|.|:        
  Fly   452 TLR-LLIHGIKWGFPLLQWSAALGMLLAGVYQLC----------------SALLLCF-------- 491

Human   494 LWPTA 498
             ||||
  Fly   492 -WPTA 495

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SCARB1NP_001354910.1 CD36 16..446 CDD:460076 125/462 (27%)
CG10345NP_650563.2 CD36 19..490 CDD:460076 138/507 (27%)

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