DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ONECUT2 and ct

DIOPT Version :10

Sequence 1:NP_004843.2 Gene:ONECUT2 / 9480 HGNCID:8139 Length:504 Species:Homo sapiens
Sequence 2:NP_524764.1 Gene:ct / 44540 FlyBaseID:FBgn0004198 Length:2175 Species:Drosophila melanogaster


Alignment Length:632 Identity:141/632 - (22%)
Similarity:208/632 - (32%) Gaps:220/632 - (34%)


- Green bases have known domain annotations that are detailed below.


Human    63 ASPSPHHAGRGAAGSLRGPPPPPTAHQELGTAAAA--------AAAASRSAMVTSMA-SIL---- 114
            |.||..|..:...|....||.||:..   ||.|.|        ..|:|.||..:.:: |||    
  Fly  1219 AYPSSLHGRKSEGGGTPAPPAPPSGP---GTGAGAPPTAAPPTGGASSNSAAPSPLSNSILPPAL 1280

Human   115 --DGGDYRPELSIPLHHAMSM--SCDSSPPGMGMSNTYTTLTPLQP----LPPIS---------- 161
              .|.::....| ||....|:  |..:.||     .|....||.:|    ||||:          
  Fly  1281 SSQGEEFAATAS-PLQRMASITNSLITQPP-----VTPHHSTPQRPTKAVLPPITQQQFDMFNNL 1339

Human   162 ---------------------------------TVSDKFHHPHPHHHPHHHHHHHHQRLSGNVSG 193
                                             :|||....|.|.|...........|:.     
  Fly  1340 NTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMK----- 1399

Human   194 SFTLMRDERG---LPAMNNLYSPYKEM--------PGMSQSLS---PLAATPLGNGLGGL----- 239
              ..:.||..   |.|.....:|.|.|        |.|.|.|:   ..|:.|:...:..|     
  Fly  1400 --MFLEDENAVHKLVASQYKIAPEKLMRTGSYSGSPQMPQGLASKMQAASLPMQKMMSELKLQEP 1462

Human   240 -----------------------------------------------------HNAQQSLPNYGP 251
                                                                 |.|||..|:   
  Fly  1463 AQAQHLMQQMQAAAMSAAMQQQQVAQAQQQAQQAQQAQQHLQQQAQQHLQQQQHLAQQQHPH--- 1524

Human   252 PGHDKMLSPNFDAHHTAMLTRG----EQHLSRGLGTPPAAMMSHLNGLHHPGHTQSHG------- 305
            ..|.:..:.....||.:||...    .||   .:..||:|..:...|   ||..|...       
  Fly  1525 QQHHQAAAAAAALHHQSMLLTSPGLPPQH---AISLPPSAGGAQPGG---PGGNQGSSNPSNSEK 1583

Human   306 -PVLAPSRERPPSSS-----SGSQVATSGQLEEINTKEVAQRITAELKRYSIPQAIFAQRVLCRS 364
             |:|.|........|     |.:....:...::::|.::..:|...|...:|.|.||.:.||..|
  Fly  1584 KPMLMPVHGTNAMRSLHQHMSPTVYEMAALTQDLDTHDITTKIKEALLANNIGQKIFGEAVLGLS 1648

Human   365 QGTLSDLLRNPKPWSKLK-SGRETFRRMWKWLQEP-EFQRMSAL----RLAACKRKEQEPNKDRN 423
            ||::|:||..||||..|. .|||.|.||..||.:. ..:|:..|    |.|:.:|:...||:..|
  Fly  1649 QGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVERLQLLKNERREASKRRRSTGPNQQDN 1713

Human   424 NS-----------------------------QKKSRLVFTDLQRRTLFAIFKENKRPSKEMQITI 459
            :|                             .||.|::|::.|:..|...|..:..|:......:
  Fly  1714 SSDTSSNDTNDFYTSSPGPGSVGSGVGGAPPSKKQRVLFSEEQKEALRLAFALDPYPNVGTIEFL 1778

Human   460 SQQLGLELTTVSNFFMNARRRSLEK------WQDDLSTGGSSSTSST 500
            :.:|||...|::|:|.|.|.|..::      .||: ......|||:|
  Fly  1779 ANELGLATRTITNWFHNHRMRLKQQVPHGPAGQDN-PIPSRESTSAT 1824

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ONECUT2NP_004843.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 29..95 11/31 (35%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 166..189 4/22 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 274..332 14/70 (20%)
CUT 331..403 CDD:460543 28/73 (38%)
HOX 426..481 CDD:197696 16/54 (30%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 485..504 6/16 (38%)
ctNP_524764.1 CUT 886..955 CDD:460543
CUT 1338..1413 CDD:460543 10/81 (12%)
CUT 1616..1691 CDD:460543 29/74 (39%)
Homeodomain 1746..1802 CDD:459649 17/55 (31%)
Blue background indicates that the domain is not in the aligned region.

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