DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CD36 and santa-maria

DIOPT Version :9

Sequence 1:NP_000063.2 Gene:CD36 / 948 HGNCID:1663 Length:472 Species:Homo sapiens
Sequence 2:NP_609121.2 Gene:santa-maria / 34024 FlyBaseID:FBgn0025697 Length:563 Species:Drosophila melanogaster


Alignment Length:491 Identity:130/491 - (26%)
Similarity:242/491 - (49%) Gaps:39/491 - (7%)


- Green bases have known domain annotations that are detailed below.


Human     2 GCDRNCGLIAGAVIGAVLAVFGGILMPVGDLLIQKTIKKQVVLEEGTIAFKNWVKTGTEVYRQFW 66
            |...|..||.| :.|..|.:||.:.......|....:.|::.|...|..::||.....::....:
  Fly    10 GQKSNRKLIIG-IFGFCLGLFGILCGMFWVDLFDWIMHKEMALAPDTRVYENWKSPPIDLSLDIY 73

Human    67 IFDVQNPQEVMMNSSNIQVKQRGPYTYRVRFLA---KENVTQDAEDNTVSFLQPNGAIFEPSLSV 128
            :::..||::....|:...::|.|||    ||:.   |.::....|:.:|::.:.:...|:.:.|.
  Fly    74 LYNWTNPEDFGNLSTKPILEQVGPY----RFIERPDKVDIHWHPENASVTYRRRSLFYFDAAGSN 134

Human   129 GTEADNFTVLNLAV--AAASHIYQNQFVQMILNSLINKSKSSMFQVRTLRELLW-GYRDPFLSL- 189
            |:..|..|.||...  |||:..|.....:.:::..:....:.|...:::.|||: ||.|..:.: 
  Fly   135 GSLDDEITTLNAVALSAAATAKYWPPVKRSLVDVGLKMYGAEMSVQKSIDELLFTGYNDAMIDVA 199

Human   190 -----------VPYPVTTTVGLFYPYNNTAD--GVYKVFNGKDNISKVAIIDTYKGKRNLSYWES 241
                       ||:   ...|.||..|.:||  ||:.||.|.|.::|:..:.::..:.|..:::|
  Fly   200 MAMPIFGDEVKVPF---DKFGWFYTRNGSADLTGVFNVFTGADQLAKLGQMHSWNYQENTGFFDS 261

Human   242 HCDMINGTDAASFPPFVEKSQVLQFFSSDICRSIYAVFESDVNLKGIPVYRFVLPSKAFASPVEN 306
            :|.|.||:.....|..::....:..|:.|:||:|...:...|:::|:..|:|....::..:..:.
  Fly   262 YCGMTNGSAGEFQPQHLKPGDSVGLFTPDMCRTIPLDYVETVDIEGLEGYKFSGGPRSVDNGTQY 326

Human   307 PDNYCFCTEKIISKNCTSYGVLDISKCKEGRPVYISLPHFLYASPDVSEPIDGLNPNEEEHRTYL 371
            |:|.|||     ...|...||::||.|:.|.||::|.|||..|.|...:.::||:||:::|..|:
  Fly   327 PENLCFC-----GGQCVPSGVMNISSCRFGSPVFMSYPHFFNADPYYPDQVEGLSPNQKDHEFYM 386

Human   372 DIEPITGFTLQFAKRLQVNLLVKPSEKIQVLKNLKRNYIVPILWLNETGTIGDEKANMFRSQVTG 436
            .::|.||..|:.|.|.|||:||:|.:.|.:...:.|.:. |::|..:...|..:.|:..:  |..
  Fly   387 VVQPSTGIPLEVAARFQVNMLVEPIQGISLYTGIPRIFF-PLVWFEQKVRITPDMADQLK--VLP 448

Human   437 KINLLG-LIEMILLSVGVVM--FVAFMISYCACRSK 469
            .:.|.| :...|.|.||:.:  :....|...:||::
  Fly   449 IVMLSGHIFAGICLIVGITLLCWTPVQILLASCRNR 484

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CD36NP_000063.2 CD36 14..463 CDD:395898 123/471 (26%)
Required for interaction with thrombospondins, THBS1 and THBS2. /evidence=ECO:0000269|PubMed:1371676 93..120 5/29 (17%)
Interaction with PTK2, PXN and LYN. /evidence=ECO:0000269|PubMed:20037584 460..472 3/10 (30%)
santa-mariaNP_609121.2 CD36 23..474 CDD:279474 122/465 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3776
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 1.030639 Normalized mean entropy S6187
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1106566at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X155
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
54.770

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