DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment HOMER1 and F55C10.5

DIOPT Version :10

Sequence 1:NP_004263.1 Gene:HOMER1 / 9456 HGNCID:17512 Length:354 Species:Homo sapiens
Sequence 2:NP_001379405.1 Gene:F55C10.5 / 3564818 WormBaseID:WBGene00010109 Length:112 Species:Caenorhabditis elegans


Alignment Length:39 Identity:10/39 - (25%)
Similarity:18/39 - (46%) Gaps:4/39 - (10%)


- Green bases have known domain annotations that are detailed below.


Human    63 ELATALSLSETQVKTWFQNRRMKHKKQLRKSQDEPKAAD 101
            ||..|:..:|::|..|    |...:.::...|.|.:..|
 Worm   329 ELVKAIREAESEVSRW----REACELEVEAGQREVEVRD 363

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HOMER1NP_004263.1 EVH1_Homer_Vesl 3..111 CDD:269917 10/39 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 114..173
Smc <181..>352 CDD:440809
Required for tetramerization. /evidence=ECO:0000250|UniProtKB:Q9Z214 290..354
F55C10.5NP_001379405.1 None
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.