DRSC/TRiP Functional Genomics Resources

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Protein Alignment HOMER2 and homer2

DIOPT Version :10

Sequence 1:XP_006720838.1 Gene:HOMER2 / 9455 HGNCID:17513 Length:364 Species:Homo sapiens
Sequence 2:NP_001018470.2 Gene:homer2 / 553661 ZFINID:ZDB-GENE-050522-417 Length:350 Species:Danio rerio


Alignment Length:352 Identity:234/352 - (66%)
Similarity:287/352 - (81%) Gaps:4/352 - (1%)


- Green bases have known domain annotations that are detailed below.


Human    13 EQPIFTTRAHVFQIDPNTKKNWMPASKQAVTVSYFYDVTRNSYRIISVDGAKVIINSTITPNMTF 77
            ||||||||||||||||.|||||:||||||||||||||..|||||||||||.||||||||||||.|
Zfish     3 EQPIFTTRAHVFQIDPTTKKNWVPASKQAVTVSYFYDSARNSYRIISVDGTKVIINSTITPNMNF 67

Human    78 TKTSQKFGQWADSRANTVFGLGFSSEQQLTKFAEKFQEVKEAAKIAKDKTQEKIETSSNHSQESG 142
            |||||||||||||||||||||||:|||||:||||||.|||||||:|::|:|:|:||||:.|||||
Zfish    68 TKTSQKFGQWADSRANTVFGLGFASEQQLSKFAEKFLEVKEAAKLAREKSQDKMETSSDQSQESG 132

Human   143 RETPSSTQASSVNGTDDEKASHAGPANTHLKSENDKLKIALTQSAANVKKWEIELQTLRESNARL 207
            |:|||..|.||:|||||||.||:||....||:|||.||.|:.:|    ||.|.|||.||:|:|||
Zfish   133 RDTPSGNQPSSINGTDDEKISHSGPETAALKAENDLLKSAVEES----KKCESELQALRDSSARL 193

Human   208 TTALQESAASVEQWKRQFSICRDENDRLRNKIDELEEQCSEINREKEKNTQLKRRIEELEAELRE 272
            ..||||:.:|.|.||.|.:...:||::||:||.|||.||.|::.|:|:|.||..||:||||:|::
Zfish   194 QEALQEAESSAESWKTQATRSLEENNQLRSKIAELELQCKELSVERERNAQLTVRIQELEADLQD 258

Human   273 KETELKDLRKQSEIIPQLMSECEYVSEKLEAAERDNQNLEDKVRSLKTDIEESKYRQRHLKVELK 337
            |:.||::||||:|||||||:|||.:|.||:|||..:..|.::|..|:.:.:..:.:|..||.|||
Zfish   259 KQQELENLRKQAEIIPQLMAECESLSGKLQAAELSSSGLRERVELLQGEAQHRQQQQNSLKTELK 323

Human   338 SFLEVLDGKIDDLHDFRRGLSKLGTDN 364
            ..:|.||||||:||:.|:|:||||.||
Zfish   324 LLMEQLDGKIDELHEVRQGISKLGIDN 350

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HOMER2XP_006720838.1 EVH1_Homer_Vesl 13..121 CDD:269917 98/107 (92%)
SMC_prok_B <103..343 CDD:274008 135/239 (56%)
homer2NP_001018470.2 None

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