DRSC/TRiP Functional Genomics Resources

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Protein Alignment HOMER2 and homer2

DIOPT Version :10

Sequence 1:XP_006720838.1 Gene:HOMER2 / 9455 HGNCID:17513 Length:364 Species:Homo sapiens
Sequence 2:NP_001016054.1 Gene:homer2 / 548808 XenbaseID:XB-GENE-1016661 Length:354 Species:Xenopus tropicalis


Alignment Length:352 Identity:263/352 - (74%)
Similarity:312/352 - (88%) Gaps:0/352 - (0%)


- Green bases have known domain annotations that are detailed below.


Human    13 EQPIFTTRAHVFQIDPNTKKNWMPASKQAVTVSYFYDVTRNSYRIISVDGAKVIINSTITPNMTF 77
            |||||||:||||||||:|||||:|||||||:||||||.||||||||||||.||||||||:|||||
 Frog     3 EQPIFTTKAHVFQIDPSTKKNWVPASKQAVSVSYFYDSTRNSYRIISVDGTKVIINSTISPNMTF 67

Human    78 TKTSQKFGQWADSRANTVFGLGFSSEQQLTKFAEKFQEVKEAAKIAKDKTQEKIETSSNHSQESG 142
            |||||||||||||||||||||||:|||||:|||:||||||||||:|:|::|||:|||||||||||
 Frog    68 TKTSQKFGQWADSRANTVFGLGFASEQQLSKFADKFQEVKEAAKLARDRSQEKMETSSNHSQESG 132

Human   143 RETPSSTQASSVNGTDDEKASHAGPANTHLKSENDKLKIALTQSAANVKKWEIELQTLRESNARL 207
            ||||.||:|||:||||||||||..|.:..||.||||||.||.||::||||||.||:||||:||||
 Frog   133 RETPCSTRASSINGTDDEKASHGEPPDAELKIENDKLKTALAQSSSNVKKWETELETLRENNARL 197

Human   208 TTALQESAASVEQWKRQFSICRDENDRLRNKIDELEEQCSEINREKEKNTQLKRRIEELEAELRE 272
            :||||||.||||.|||||..|:||:|:|||||.|||.||.||.:|||:|.:|..|::|||.|:::
 Frog   198 STALQESIASVEHWKRQFLSCKDESDQLRNKIGELEAQCDEIEKEKERNKELSNRLQELEVEIQD 262

Human   273 KETELKDLRKQSEIIPQLMSECEYVSEKLEAAERDNQNLEDKVRSLKTDIEESKYRQRHLKVELK 337
            ||.||:|||||||::||||:|||.::|||:..|..||.||:|||:||.|::||::|..|||:|||
 Frog   263 KEAELEDLRKQSELLPQLMAECESMTEKLQDTEMRNQELEEKVRTLKKDMDESRHRHGHLKLELK 327

Human   338 SFLEVLDGKIDDLHDFRRGLSKLGTDN 364
            .||.|.|||:||||:.|:|||||..||
 Frog   328 HFLNVFDGKMDDLHELRQGLSKLQIDN 354

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HOMER2XP_006720838.1 EVH1_Homer_Vesl 13..121 CDD:269917 97/107 (91%)
SMC_prok_B <103..343 CDD:274008 165/239 (69%)
homer2NP_001016054.1 EVH1_Homer_Vesl 3..111 CDD:269917 97/107 (91%)
PRK02224 <93..273 CDD:179385 129/179 (72%)
SMC_N <220..>350 CDD:481474 80/129 (62%)

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