DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment HOMER2 and Homer2

DIOPT Version :10

Sequence 1:XP_006720838.1 Gene:HOMER2 / 9455 HGNCID:17513 Length:364 Species:Homo sapiens
Sequence 2:NP_445761.1 Gene:Homer2 / 29547 RGDID:620705 Length:354 Species:Rattus norvegicus


Alignment Length:352 Identity:335/352 - (95%)
Similarity:347/352 - (98%) Gaps:0/352 - (0%)


- Green bases have known domain annotations that are detailed below.


Human    13 EQPIFTTRAHVFQIDPNTKKNWMPASKQAVTVSYFYDVTRNSYRIISVDGAKVIINSTITPNMTF 77
            ||||||||||||||||:|||||:||||||||||||||||||||||||||||||||||||||||||
  Rat     3 EQPIFTTRAHVFQIDPSTKKNWVPASKQAVTVSYFYDVTRNSYRIISVDGAKVIINSTITPNMTF 67

Human    78 TKTSQKFGQWADSRANTVFGLGFSSEQQLTKFAEKFQEVKEAAKIAKDKTQEKIETSSNHSQESG 142
            |||||||||||||||||||||||||||||||||||||||:|||::|:||:|||||||||||||||
  Rat    68 TKTSQKFGQWADSRANTVFGLGFSSEQQLTKFAEKFQEVREAARLARDKSQEKIETSSNHSQESG 132

Human   143 RETPSSTQASSVNGTDDEKASHAGPANTHLKSENDKLKIALTQSAANVKKWEIELQTLRESNARL 207
            .||||||||||||||||||||||.||:||||||||||||||||||||||||||||||||||||||
  Rat   133 CETPSSTQASSVNGTDDEKASHASPADTHLKSENDKLKIALTQSAANVKKWEIELQTLRESNARL 197

Human   208 TTALQESAASVEQWKRQFSICRDENDRLRNKIDELEEQCSEINREKEKNTQLKRRIEELEAELRE 272
            |||||||||||||||||||||||||||||:||:||||||.||||||||||||||||||||:|:||
  Rat   198 TTALQESAASVEQWKRQFSICRDENDRLRSKIEELEEQCGEINREKEKNTQLKRRIEELESEVRE 262

Human   273 KETELKDLRKQSEIIPQLMSECEYVSEKLEAAERDNQNLEDKVRSLKTDIEESKYRQRHLKVELK 337
            ||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||
  Rat   263 KEMELKDLRKQSEIIPQLMSECEYVSEKLEAAERDNQNLEDKVRSLKTDIEESKYRQRHLKGELK 327

Human   338 SFLEVLDGKIDDLHDFRRGLSKLGTDN 364
            |||||||||||||||||||||||||||
  Rat   328 SFLEVLDGKIDDLHDFRRGLSKLGTDN 354

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HOMER2XP_006720838.1 EVH1_Homer_Vesl 13..121 CDD:269917 104/107 (97%)
SMC_prok_B <103..343 CDD:274008 224/239 (94%)
Homer2NP_445761.1 EVH1_Homer_Vesl 3..111 CDD:269917 104/107 (97%)
SMC_N <93..>326 CDD:481474 217/232 (94%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 114..163 43/48 (90%)

Return to query results.
Submit another query.