DRSC/TRiP Functional Genomics Resources

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Protein Alignment HOMER2 and F14H3.12

DIOPT Version :10

Sequence 1:XP_006720838.1 Gene:HOMER2 / 9455 HGNCID:17513 Length:364 Species:Homo sapiens
Sequence 2:NP_507047.2 Gene:F14H3.12 / 184497 WormBaseID:WBGene00008831 Length:142 Species:Caenorhabditis elegans


Alignment Length:132 Identity:24/132 - (18%)
Similarity:43/132 - (32%) Gaps:52/132 - (39%)


- Green bases have known domain annotations that are detailed below.


Human    76 TFTKTSQKFGQWADSRANTVFGLGFSSEQQLTKFAEKFQEVKEAAKIAKDKTQEKIETSSNHSQE 140
            |.|...|:||          |.|..:.::...:.......:|:.:.:..|:..::|:        
 Worm    23 TLTAIRQRFG----------FALETADQEDQARAVRFTWSLKKTSMLEPDEILKEIQ-------- 69

Human   141 SGRETPSSTQASSVNGTDDE-------KASHAGPANTHLKSENDKLKIALTQSAANVKKWEIELQ 198
                     :.....|.|.|       :.||..|               ||.::.   ||:||:.
 Worm    70 ---------KVLESYGIDYEQQKRYLLRCSHVDP---------------LTDASV---KWDIEVC 107

Human   199 TL 200
            ||
 Worm   108 TL 109

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HOMER2XP_006720838.1 EVH1_Homer_Vesl 13..121 CDD:269917 8/44 (18%)
SMC_prok_B <103..343 CDD:274008 17/105 (16%)
F14H3.12NP_507047.2 AMPKA_C_like 45..140 CDD:473060 17/100 (17%)

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