DRSC/TRiP Functional Genomics Resources

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Protein Alignment GGPS1 and BTS1

DIOPT Version :9

Sequence 1:NP_001032354.1 Gene:GGPS1 / 9453 HGNCID:4249 Length:300 Species:Homo sapiens
Sequence 2:NP_015256.1 Gene:BTS1 / 856036 SGDID:S000005990 Length:335 Species:Saccharomyces cerevisiae


Alignment Length:316 Identity:128/316 - (40%)
Similarity:183/316 - (57%) Gaps:30/316 - (9%)


- Green bases have known domain annotations that are detailed below.


Human     9 QRILLEPYKYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIEDNSKLR 73
            :.::.:||.::|..|||..|..|....|..:.:|:|:|.|:.::.|:|||:||||||||||:.||
Yeast    20 ESLISKPYNHILLKPGKNFRLNLIVQINRVMNLPKDQLAIVSQIVELLHNSSLLIDDIEDNAPLR 84

Human    74 RGFPVAHSIYGIPSVINSANYVYFLGLEKV--LTLDHP---DAVKLFTRQLLELHQGQGLDIYWR 133
            ||...:|.|:|:||.||:|||:||..::.|  ||...|   :.:.:|..:|:.||:|||||||||
Yeast    85 RGQTTSHLIFGVPSTINTANYMYFRAMQLVSQLTTKEPLYHNLITIFNEELINLHRGQGLDIYWR 149

Human   134 D--NYTCPTEEEYKAMVLQKTGGLFGLAVGLMQLF---SDYKEDLKPLLNTLGLFFQIRDDYANL 193
            |  ....||:|.|..||:.||||||.|.:.||:..   |.:...|.|.:|.||:.:||||||.||
Yeast   150 DFLPEIIPTQEMYLNMVMNKTGGLFRLTLRLMEALSPSSHHGHSLVPFINLLGIIYQIRDDYLNL 214

Human   194 HSKEYSENKSFCEDLTEGKFSFPTIHAI------WSRPESTQVQNILRQRTENIDIKKYCVHYLE 252
            ...:.|..|.|.||:||||.|||.:||:      ....:..::..||..||.:.|||...:..||
Yeast   215 KDFQMSSEKGFAEDITEGKLSFPIVHALNFTKTKGQTEQHNEILRILLLRTSDKDIKLKLIQILE 279

Human   253 -DVGSFEYTRNTLKEL--------EAK-----AYKQIDARGGNPELVALVKHLSKM 294
             |..|..||:|.:.:|        |.|     |.....|...:.||:.::.|||::
Yeast   280 FDTNSLAYTKNFINQLVNMIKNDNENKYLPDLASHSDTATNLHDELLYIIDHLSEL 335

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GGPS1NP_001032354.1 polyprenyl_synt 9..251 CDD:395277 111/257 (43%)
BTS1NP_015256.1 polyprenyl_synt 20..278 CDD:395277 111/257 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C159051662
Domainoid 1 1.000 205 1.000 Domainoid score I603
eggNOG 1 0.900 - - E1_COG0142
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H31267
Inparanoid 1 1.050 220 1.000 Inparanoid score I885
Isobase 1 0.950 - 0 Normalized mean entropy S1150
OMA 1 1.010 - - QHG62161
OrthoFinder 1 1.000 - - FOG0007302
OrthoInspector 1 1.000 - - oto145666
orthoMCL 1 0.900 - - OOG6_103487
Panther 1 1.100 - - LDO PTHR12001
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X7
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1514.710

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