DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GGPS1 and qless

DIOPT Version :10

Sequence 1:NP_004828.1 Gene:GGPS1 / 9453 HGNCID:4249 Length:300 Species:Homo sapiens
Sequence 2:NP_733425.1 Gene:qless / 43697 FlyBaseID:FBgn0051005 Length:436 Species:Drosophila melanogaster


Alignment Length:336 Identity:72/336 - (21%)
Similarity:136/336 - (40%) Gaps:74/336 - (22%)


- Green bases have known domain annotations that are detailed below.


Human     8 VQRILLEPY--------------KYLLQL-----------------PGKQVRTK----LSQAFNH 37
            |:...::||              :|||:.                 .||.:|..    :::|.|:
  Fly   106 VREFQIDPYIILDDDLKYFYDDVRYLLKSGTSQPELDTIASYYFDGQGKALRPMVTMLMAKAINY 170

Human    38 WLKVPEDKL-----QIIIEVTEMLHNASLLIDDIEDNSKLRRGFPVAHSIYGIPSVINSANYVYF 97
            .|.....:|     ||.: .:||:|:|||:.||:.|.|..|||.|..::::....|..:.:|:..
  Fly   171 HLNNESHQLVHKQRQIAL-FSEMVHSASLVHDDVIDQSDFRRGKPSVNALWNHKKVTMAGDYILS 234

Human    98 LGLEKVLTLDHPDAVKLFTRQLLELHQGQGLDIYWRDNYTCPTEEE----YKAMVLQKTGGLFGL 158
            :....:..|...|...:.::.|.:|.||:.:.:..|:     ||.|    |.....:||..|...
  Fly   235 IASIMIARLRSDDVTIVLSQILTDLVQGEFMQLGSRE-----TENERFAHYLTKTYRKTASLIAN 294

Human   159 AVGLMQLFSDYKEDLKPLL----NTLGLFFQIRDDYANLHSKEYSENKSFCEDLTEGKFSFPTIH 219
            |:....:.:...:::..:.    ..:||.||:.||..:..|......|....||..|..:.|.:.
  Fly   295 ALKATAVIAQADDNVAEVAFQYGRNIGLAFQLVDDMLDFVSSTEQMGKPTAADLKLGLATAPVLF 359

Human   220 AIWSRPESTQVQNILRQRTENIDIKKYCVHYLEDVGSFEYTRNT--LKELEAKAYKQIDARGGNP 282
            |....||...:  ::|:.:|..|:::          :||....:  |::....|.|..:      
  Fly   360 ACEKYPELNPM--VMRRFSEPGDVER----------AFELVHKSHGLEQTRFLAKKHCN------ 406

Human   283 ELVALVKHLSK 293
            |.:.|.:.|::
  Fly   407 EAIRLAQELTE 417

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GGPS1NP_004828.1 polyprenyl_synt 9..250 CDD:459773 63/288 (22%)
qlessNP_733425.1 polyprenyl_synt 138..387 CDD:459773 59/266 (22%)

Return to query results.
Submit another query.