DRSC/TRiP Functional Genomics Resources

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Protein Alignment GGPS1 and ggps1

DIOPT Version :10

Sequence 1:NP_004828.1 Gene:GGPS1 / 9453 HGNCID:4249 Length:300 Species:Homo sapiens
Sequence 2:NP_001278689.2 Gene:ggps1 / 336798 ZFINID:ZDB-GENE-030131-8742 Length:309 Species:Danio rerio


Alignment Length:296 Identity:251/296 - (84%)
Similarity:275/296 - (92%) Gaps:0/296 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     2 EKTQETVQRILLEPYKYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDI 66
            ||.:.|.:||||||||||||||||||||||||||||||.|||||||:||||||||||||||||||
Zfish     3 EKQRATSERILLEPYKYLLQLPGKQVRTKLSQAFNHWLNVPEDKLQVIIEVTEMLHNASLLIDDI 67

Human    67 EDNSKLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLTLDHPDAVKLFTRQLLELHQGQGLDIY 131
            ||:|||||||||||||||||||||||||||||||||||.|:||:||::|||||||||:||||||:
Zfish    68 EDSSKLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLMLEHPEAVRVFTRQLLELHRGQGLDIH 132

Human   132 WRDNYTCPTEEEYKAMVLQKTGGLFGLAVGLMQLFSDYKEDLKPLLNTLGLFFQIRDDYANLHSK 196
            |||.||||:|.||:|||||||||||||||||||||||:|.||||||:||||:||||||||||:||
Zfish   133 WRDTYTCPSEAEYRAMVLQKTGGLFGLAVGLMQLFSDWKRDLKPLLDTLGLYFQIRDDYANLNSK 197

Human   197 EYSENKSFCEDLTEGKFSFPTIHAIWSRPESTQVQNILRQRTENIDIKKYCVHYLEDVGSFEYTR 261
            |||.|||||||||||||||||||||||.||||||||||||||||:|||:|||.|||.||||.|||
Zfish   198 EYSANKSFCEDLTEGKFSFPTIHAIWSHPESTQVQNILRQRTENLDIKRYCVDYLEKVGSFAYTR 262

Human   262 NTLKELEAKAYKQIDARGGNPELVALVKHLSKMFKE 297
            .||.:||.:||:.|...||||||.|||:|||:|:||
Zfish   263 QTLLDLEVEAYRLIKELGGNPELEALVEHLSRMYKE 298

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GGPS1NP_004828.1 polyprenyl_synt 9..250 CDD:459773 216/240 (90%)
ggps1NP_001278689.2 None

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