DRSC/TRiP Functional Genomics Resources

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Protein Alignment CD33 and hbs

DIOPT Version :9

Sequence 1:XP_011525833.1 Gene:CD33 / 945 HGNCID:1659 Length:418 Species:Homo sapiens
Sequence 2:NP_001286439.1 Gene:hbs / 44129 FlyBaseID:FBgn0029082 Length:1235 Species:Drosophila melanogaster


Alignment Length:300 Identity:64/300 - (21%)
Similarity:97/300 - (32%) Gaps:79/300 - (26%)


- Green bases have known domain annotations that are detailed below.


Human    75 FWLQVQESVTVQEGLCVLV---------------PCTFFHPIPYYDKNSPVHGYWFREGAIISRD 124
            ||:.:..:|.:...:|.::               |...||..|        |.....||......
  Fly     3 FWITLTFAVHLATTICHVMAAVTAPTPAAQVAAPPVQKFHLTP--------HDLQILEGTDTLLR 59

Human   125 SPVATNKLDQEVQEETQG-------------RFRLLGDPSRNNCSLSIVDARRRDNGSYFFRME- 175
            ..|:...  .:||....|             |:.:|.|..:|..:|.|.:|...|:..|..::. 
  Fly    60 CEVSNRA--GKVQWTKDGFALGFSAVIPGFPRYSVLVDAKQNAYNLQIKNATLEDDAEYQCQVGP 122

Human   176 -------RGSTKYSYKSPQLSVHVTDLTHRPKILIPGTLEPGHSKNLT-----------CSVSWA 222
                   |.:.|.|..:...|:.:.......::      |....:|||           ..:.|.
  Fly   123 AAGNPAIRANAKLSIVAAPSSIVIEGYARNARV------EVEERQNLTLHCIAENANPAAEIVWF 181

Human   223 CEQG-----TPPIFSWLSAAPTSLGPRTTHSSVLIITPRPQDHGTNLTCQV--KFAGAGVTTERT 280
              ||     |.||.:....||    .|.|.||.|.:.||.:|.....:|:.  |.....|.....
  Fly   182 --QGEVPVSTAPIVTVNQTAP----KRFTTSSTLHLQPRAEDDYKEFSCEARHKALPPDVPMRAQ 240

Human   281 IQLNVTYVPQNPTTGIFPGDGSGKQETRAGVVHGAIGGAG 320
            :||:|.|.|..|   .|.|...|:...|...|..|....|
  Fly   241 VQLSVLYPPGAP---FFEGYSQGETLHRGQEVQIACRSRG 277

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CD33XP_011525833.1 Ig 77..193 CDD:299845 26/151 (17%)
IG_like 80..182 CDD:214653 24/137 (18%)
ig 200..281 CDD:278476 23/98 (23%)
hbsNP_001286439.1 Ig 44..122 CDD:299845 17/87 (20%)
IG_like 45..137 CDD:214653 19/101 (19%)
Ig 153..231 CDD:299845 22/89 (25%)
IG_like 258..342 CDD:214653 4/19 (21%)
Ig 266..327 CDD:299845 2/11 (18%)
IG_like 357..>414 CDD:214653
Ig 360..427 CDD:299845
Ig <468..526 CDD:299845
I-set 547..633 CDD:254352
Ig 556..631 CDD:299845
I-set 644..735 CDD:254352
IGc2 668..725 CDD:197706
IG_like 751..829 CDD:214653
IGc2 753..815 CDD:197706
Ig 852..928 CDD:143165
FN3 935..1017 CDD:238020
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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