DRSC/TRiP Functional Genomics Resources

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Protein Alignment CD33 and Cd33

DIOPT Version :9

Sequence 1:XP_011525833.1 Gene:CD33 / 945 HGNCID:1659 Length:418 Species:Homo sapiens
Sequence 2:NP_001104528.1 Gene:Cd33 / 12489 MGIID:99440 Length:403 Species:Mus musculus


Alignment Length:302 Identity:162/302 - (53%)
Similarity:193/302 - (63%) Gaps:23/302 - (7%)


- Green bases have known domain annotations that are detailed below.


Human    55 MPLLLLLPLLWAGALAMDPNFWLQVQESVTVQEGLCVLVPCTFFHPIPYYDKNSPVHGYWFREGA 119
            :||.||.    ||:||.|..|.|...|||||:|||||.|||:.|:|...... .||.|.|.|:|.
Mouse     5 LPLFLLC----AGSLAQDLEFQLVAPESVTVEEGLCVHVPCSVFYPSIKLTL-GPVTGSWLRKGV 64

Human   120 IISRDSPVATNKLDQEVQEETQGRFRLLGDPSRNNCSLSIVDARRRDNGSYFFRMERGS-TKYSY 183
            .:..||||||:...|.||:.|||||:|||||.:::|||.|.||::.|.|.||||:.|.. .:|||
Mouse    65 SLHEDSPVATSDPRQLVQKATQGRFQLLGDPQKHDCSLFIRDAQKNDTGMYFFRVVREPFVRYSY 129

Human   184 KSPQLSVHVTDLTHRPKILIPGTLEPGHSKNLTCSVSWACEQGTPPIFSWLSAAPTSLGPRTTHS 248
            |..|||:|||.|:..|.|:||||||.|:..||||||.|||||||||.|||:|.|.|||..|||.|
Mouse   130 KKSQLSLHVTSLSRTPDIIIPGTLEAGYPSNLTCSVPWACEQGTPPTFSWMSTALTSLSSRTTDS 194

Human   249 SVLIITPRPQDHGTNLTCQVKFAGAGVTTERTIQLNVTYVPQNPTTGIFPGDGSGKQETRAGVVH 313
            |||..||:||||||.|||.|.|:|||||.|||||||||             ..||:...   :|.
Mouse   195 SVLTFTPQPQDHGTKLTCLVTFSGAGVTVERTIQLNVT-------------RKSGQMRE---LVL 243

Human   314 GAIGGAGVTALLALCLCLIFFIVKTHRRKAARTAVGRNDTHP 355
            .|:|.|.| .||.|.|||:|.||...|||..:.:|.....:|
Mouse   244 VAVGEATV-KLLILGLCLVFLIVMFCRRKTTKLSVHMGCENP 284

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CD33XP_011525833.1 Ig 77..193 CDD:299845 62/116 (53%)
IG_like 80..182 CDD:214653 53/102 (52%)
ig 200..281 CDD:278476 58/80 (73%)
Cd33NP_001104528.1 Ig 21..139 CDD:299845 63/118 (53%)
IG_like 26..119 CDD:214653 51/93 (55%)
Ig 150..214 CDD:299845 47/63 (75%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C83965644
Domainoid 1 1.000 126 1.000 Domainoid score I39015
eggNOG 1 0.900 - - E1_2CYFK
HGNC 1 1.500 - -
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 281 1.000 Inparanoid score I15334
Isobase 00.000 Not matched by this tool.
NCBI 1 1.000 - -
OMA 1 1.010 - - QHG33987
OrthoDB 1 1.010 - - D158400at40674
OrthoFinder 1 1.000 - - FOG0001383
OrthoInspector 1 1.000 - - oto126827
orthoMCL 1 0.900 - - OOG6_112647
Panther 1 1.100 - - O PTHR12035
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X34
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1515.310

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