DRSC/TRiP Functional Genomics Resources

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Protein Alignment MED26 and TfIIS

DIOPT Version :10

Sequence 1:NP_004822.2 Gene:MED26 / 9441 HGNCID:2376 Length:600 Species:Homo sapiens
Sequence 2:NP_476967.1 Gene:TfIIS / 34883 FlyBaseID:FBgn0010422 Length:313 Species:Drosophila melanogaster


Alignment Length:233 Identity:48/233 - (20%)
Similarity:93/233 - (39%) Gaps:71/233 - (30%)


- Green bases have known domain annotations that are detailed below.


Human    32 LEVISSLEKYPITKEALEETRLGKLINDVRKKTKNEELAKRAKKLLRSWQK-LIEPAHQHEAALR 95
            |:::.:|:...|..:.|.:||:|..:|::||.:|::|:...||.|:::|:: |..||   .....
  Fly    28 LDLLKALQTLNINLDILTKTRIGMTVNELRKSSKDDEVIALAKTLIKNWKRFLASPA---PTTPN 89

Human    96 GLAGATGSANGGAHNCRPEVGAAGPPRSIHDLKSRNDLQRLPGQRLDRLGSRKRRGDQRDLGHPG 160
            ..:...||:|..:.:           :|....||.:.:.   |:  |:..|.....|:...|   
  Fly    90 NSSAKEGSSNNSSAS-----------KSTSAAKSSSSIS---GK--DKSSSSSSSKDKEKKG--- 135

Human   161 PPPKVSKASHDPLVPNSSPLPTNGIS------------------------GSPESFASSLDGSGH 201
                 |.:|      :.:..|:.|::                        |.||..|:.|:.:.:
  Fly   136 -----STSS------SQTSFPSGGMTDAVRIKCREMLATALKIGEVPEGCGEPEEMAAELEDAIY 189

Human   202 AGPEGSRLERDEND-KHSGKI---PVNAVRPHTSSPGL 235
            :       |.:..| |:..:|   ..|...|  .:|||
  Fly   190 S-------EFNNTDMKYKNRIRSRVANLKDP--KNPGL 218

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MED26NP_004822.2 TFS2N 12..86 CDD:197766 17/54 (31%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 99..330 29/165 (18%)
Med26_M 177..417 CDD:464807 16/87 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 348..402
Med26_C 419..598 CDD:464806
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 431..461
TfIISNP_476967.1 TFSII 5..313 CDD:273592 48/233 (21%)
Blue background indicates that the domain is not in the aligned region.

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