DRSC/TRiP Functional Genomics Resources

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Protein Alignment ABCG2 and abcg2a

DIOPT Version :10

Sequence 1:NP_004818.2 Gene:ABCG2 / 9429 HGNCID:74 Length:655 Species:Homo sapiens
Sequence 2:XP_073794813.1 Gene:abcg2a / 735312 ZFINID:ZDB-GENE-050517-35 Length:644 Species:Danio rerio


Alignment Length:626 Identity:396/626 - (63%)
Similarity:502/626 - (80%) Gaps:15/626 - (2%)


- Green bases have known domain annotations that are detailed below.


Human    34 GAVLSFHNICYRVKLKSGFLPCR-KPVEKEILSNINGIMKPGLNAILGPTGGGKSSLLDVLAARK 97
            ||.:|||||.|.:|:||||  |: |..:|.||..:|||||||||||||.||.||||.||||||||
Zfish    30 GATVSFHNINYSLKMKSGF--CKSKSTKKNILIGLNGIMKPGLNAILGATGSGKSSFLDVLAARK 92

Human    98 DPSGLSGDVLINGAPRPANFKCNSGYVVQDDVVMGTLTVRENLQFSAALRLATTMTNHEKNERIN 162
            ||:||||:|||:|||:|.||||.||||||||||||||||||||:|||||||..::...||:|::.
Zfish    93 DPAGLSGEVLIDGAPQPPNFKCLSGYVVQDDVVMGTLTVRENLRFSAALRLPKSIKQREKDEKVE 157

Human   163 RVIQELGLDKVADSKVGTQFIRGVSGGERKRTSIGMELITDPSILFLDEPTTGLDSSTANAVLLL 227
            |:||||||.|||||:||||.||||||||||||:||||||.||.:|||||||||||:||||:||:|
Zfish   158 RLIQELGLSKVADSRVGTQLIRGVSGGERKRTNIGMELIIDPPVLFLDEPTTGLDASTANSVLML 222

Human   228 LKRMSKQGRTIIFSIHQPRYSIFKLFDSLTLLASGRLMFHGPAQEALGYFESAGYHCEAYNNPAD 292
            ||:|...|||||.|||||||||::||||||||..|:|::|||||:||.||...||.||.:|||||
Zfish   223 LKKMGNNGRTIILSIHQPRYSIYRLFDSLTLLVGGKLVYHGPAQDALSYFSQIGYTCEPHNNPAD 287

Human   293 FFLDIINGDSTAVALNREEDFKATEIIEP---SKQDKPLIEKLAEIYVNSSFYKETKAELHQLSG 354
            ||||:|||||:||.||:..:    |:::.   |...|.:.::|.|.|..||.:::|.|:|.::..
Zfish   288 FFLDVINGDSSAVTLNKLYE----EVVDQDQLSSSLKGIEDRLVEEYQRSSIFQQTHADLQRIVQ 348

Human   355 GEKKKKITVFKEISYTTSFCHQLRWVSKRSFKNLLGNPQASIAQIIVTVVLGLVIGAIYFGLKND 419
            |:........:.|:|:||||||..||.||:|:||:.|||.|:|||.|.:.|.||:|||:||:..:
Zfish   349 GQDYSTRPKSRTITYSTSFCHQFHWVLKRTFRNLMLNPQTSVAQIGVMIFLALVVGAIFFGVAEN 413

Human   420 STGIQNRAGVLFFLTTNQCFSSVSAVELFVVEKKLFIHEYISGYYRVSSYFLGKLLSDLLPMRML 484
            |:|||||.|.|||:|||||||||||.|||:.|:|||:|||||||||||.|||.|:|||:|.:|.:
Zfish   414 SSGIQNRMGALFFITTNQCFSSVSAAELFIAERKLFVHEYISGYYRVSVYFLSKILSDILTLRTI 478

Human   485 PSIIFTCIVYFMLGLKPKADAFFVMMFTLMMVAYSASSMALAIAAGQSVVSVATLLMTICFVFMM 549
            |::||:|:.|||:||||.|:|||:.:|:::||:|:|::|.|||:|.|:||::|.:.|||.|||||
Zfish   479 PAVIFSCVAYFMIGLKPAAEAFFIFLFSIIMVSYTATAMTLAISADQTVVAIANIFMTISFVFMM 543

Human   550 IFSGLLVNLTTIASWLSWLQYFSIPRYGFTALQHNEFLGQNFCPGLNATGNNPCNYATCTGEEYL 614
            |||||||||.::|:||:||:||||||||.:|||.|||.|..||...|.:| :.|:    :|||:|
Zfish   544 IFSGLLVNLPSVATWLNWLKYFSIPRYGLSALQINEFTGLFFCDNRNNSG-SVCS----SGEEFL 603

Human   615 VKQGIDLSPWGLWKNHVALACMIVIFLTIAYLKLLFLKKYS 655
            .:||||.|.||||:||:||..|..|||.||||||.|:||::
Zfish   604 QEQGIDYSAWGLWQNHLALGIMTFIFLCIAYLKLRFIKKFT 644

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ABCG2NP_004818.2 3a01204 55..649 CDD:273361 379/597 (63%)
abcg2aXP_073794813.1 None

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