DRSC/TRiP Functional Genomics Resources

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Protein Alignment ABCG2 and wht-2

DIOPT Version :10

Sequence 1:NP_004818.2 Gene:ABCG2 / 9429 HGNCID:74 Length:655 Species:Homo sapiens
Sequence 2:NP_502164.1 Gene:wht-2 / 178069 WormBaseID:WBGene00007513 Length:610 Species:Caenorhabditis elegans


Alignment Length:644 Identity:194/644 - (30%)
Similarity:318/644 - (49%) Gaps:72/644 - (11%)


- Green bases have known domain annotations that are detailed below.


Human    19 GFPATASNDLKAFTEGAVLSFHNICYRVKLKSGFLPCRKPVEKEILSNINGIMKPG-LNAILGPT 82
            |..|:..:.|:| .:...|::|||....: |||         |:||.|::||.||| |.|::|.:
 Worm    17 GAAASMISALEA-VDPVTLTWHNISIHAE-KSG---------KQILENVSGIAKPGQLLALMGAS 70

Human    83 GGGKSSLLDVLAARKDPSGL--SGDVLINGAPRPANFKCNSGYVVQDDVVMGTLTVRENLQFSAA 145
            |.||::||::|.:| :..||  ||.|.:||..........|||..||::.:|||||:|.|...|.
 Worm    71 GAGKTTLLNMLLSR-NLRGLETSGSVKVNGHELGRGITAISGYAQQDELFVGTLTVKEYLDIQAK 134

Human   146 LRLATTMTNHEKNERINRVIQELGLDKVADSKVGT---QFIRGVSGGERKRTSIGMELITDPSIL 207
            ||:  ...:.::..|:..|:.:|||.|..::::||   |  :|:||||.:|.:...||:::||||
 Worm   135 LRV--NGDSEKRRRRVGNVMSQLGLYKCQNTRIGTIGGQ--KGISGGEMRRLTFACELLSNPSIL 195

Human   208 FLDEPTTGLDSSTANAVLLLLKRMSKQGRTIIFSIHQPRYSIFKLFDSLTLLASGRLMFHGPAQE 272
            |.|||||||||..|.:|:.:|..::|.|||:|.:||||...::.:||.:..:|.|:..|.|..::
 Worm   196 FCDEPTTGLDSFMAESVVQVLSNLAKSGRTVICTIHQPSSQLYLMFDRVMFMAGGKTAFLGSPRD 260

Human   273 ALGYFESAGYHCEAYNNPADFFLDIINGDSTAVALNREEDFKATEIIEPSKQDK--PLIEKLAEI 335
            |:.:||.||:.|....||||..:.                   |..:.|:::||  ..||.:...
 Worm   261 AIQFFEDAGFACPRNFNPADLIIH-------------------TLAVMPNEEDKCRQRIEVIYTK 306

Human   336 YVNSSFYKETKAELHQLSGGEKKKKITVFKEISYTTSFCHQLRWVSKRSFKNLLGNPQASIAQII 400
            :.|||:.:..|..:.:...|::..:       .:.|....|:..:.:||..:...||..:.|::|
 Worm   307 FQNSSYGRTLKFGVEKSDEGQRPSE-------RHKTGILTQIGALLERSAIDTWRNPSLTRAKVI 364

Human   401 VTVVLGLVIGAIYFGLKNDSTGIQNRAGVLFFLTTNQCFSSVSAVELFV-VEKKLFIHEYISGYY 464
            ...::||.||.:|......|.||.|..|.||:|.....:|::..:..|: .:..|...||..|.|
 Worm   365 QKSIMGLFIGLLYLQSPLTSIGISNLNGALFYLVCELTYSTIFGILNFLPADFPLVSREYHDGLY 429

Human   465 RVSSYFLGKLLSDLLPMRMLPSIIFTCIVYFMLGLKPKADAFFVMMFTLMMVAYSASSMALAIAA 529
            .|.||::.:.|| .||:.....:|...:.|:|:|................::..|:|:..:.|:.
 Worm   430 SVFSYYVARCLS-YLPLFTADGLIMLLVSYWMVGFSSSITQVLYACLIAFLIEQSSSACGIMISC 493

Human   530 GQSVVSVATLLMTICFVFMMIFSGLLVNLTTIASWLSWLQYFSIPRYGFTALQHNEFLGQNFCPG 594
            ....:.:|..........:.:..||..|:..:.|::||:||.|..||||.|...|::        
 Worm   494 ISPSLPIAMSTAGPMLTLLSLTGGLYANVGALPSYISWIQYLSWFRYGFEAFAINQW-------- 550

Human   595 LNATGNNPCNYATCTGEEYLVKQGIDLSPWG-----LWKNHVALACMIVIFLTIAYLKL 648
               :..|..|....|.|    |:...||...     .:.:...::..|:||.||.|..|
 Worm   551 ---SSVNEQNTTIWTDE----KRDSVLSQLSFRAEMFYPDLFIMSAFILIFYTIGYAGL 602

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ABCG2NP_004818.2 3a01204 55..649 CDD:273361 183/608 (30%)
wht-2NP_502164.1 3a01204 44..610 CDD:273361 186/616 (30%)

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