Sequence 1: | NP_004813.2 | Gene: | NTN1 / 9423 | HGNCID: | 8029 | Length: | 604 | Species: | Homo sapiens |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_476617.1 | Gene: | LanA / 38723 | FlyBaseID: | FBgn0002526 | Length: | 3712 | Species: | Drosophila melanogaster |
Alignment Length: | 488 | Identity: | 146/488 - (29%) |
---|---|---|---|
Similarity: | 226/488 - (46%) | Gaps: | 79/488 - (16%) |
- Green bases have known domain annotations that are detailed below.
Human 53 PDFVNAAFGKDVRVSSTCGRP---PARYCVVSERGEE---------RLRSCHLCNASDPKKAHPP 105
Human 106 AFLTDLNNPHNLTCWQS---ENYLQFPHNVTLTLSLGKKFEVTYVSLQF-CSPRPESMAIYKSMD 166
Human 167 YGRTWVPFQFYS---TQCRKMYNRPHRAPITKQNEQEAVCTDSHTDMRPLSGGLIAFSTLDGRPS 228
Human 229 AHDFDNSPVLQDWVTATDIRVAFSRL-----HTFGDENEDDSELARDSYFYAVSDLQVGGRCKCN 288
Human 289 GHAARC-VRDRDDS---LVCDCRHNTAGPECDRCKPFHYDRPWQRATAREANECVACNCNLHARR 349
Human 350 CRFNMELYK------LSGR-KSGGVCLNCRHNTAGRHCHYCKEGYYRDMGKPITHRKACKACDCH 407
Human 408 PVGAAGKTCNQTTGQCPCKDGVTGITCNRCAKGYQQSRSPIAPCIKIPVAPPTTAASSVEEPEDC 472
Human 473 DS--------YCKASKGK---LKINMK-KYCKK 493 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
NTN1 | NP_004813.2 | LamNT | 46..283 | CDD:214532 | 73/253 (29%) |
EGF_Lam | 284..329 | CDD:238012 | 20/48 (42%) | ||
Laminin_EGF | 341..401 | CDD:395007 | 25/66 (38%) | ||
Laminin_EGF | 404..>441 | CDD:395007 | 11/36 (31%) | ||
NTR_netrin-1_like | 487..601 | CDD:239634 | 3/8 (38%) | ||
Cell attachment site. /evidence=ECO:0000255 | 530..532 | ||||
LanA | NP_476617.1 | LamNT | 18..271 | CDD:214532 | 73/253 (29%) |
EGF_Lam | 272..>314 | CDD:238012 | 19/41 (46%) | ||
EGF_Lam | 332..389 | CDD:238012 | 22/56 (39%) | ||
EGF_Lam | 402..443 | CDD:238012 | 13/63 (21%) | ||
EGF_Lam | 448..491 | CDD:238012 | 10/34 (29%) | ||
Laminin_EGF | 495..543 | CDD:278482 | |||
Laminin_EGF | 541..589 | CDD:278482 | |||
Laminin_EGF | 587..634 | CDD:278482 | |||
EGF_Lam | 631..673 | CDD:238012 | |||
Laminin_EGF | 677..729 | CDD:278482 | |||
Laminin_EGF | 732..782 | CDD:278482 | |||
EGF_Lam | 785..828 | CDD:238012 | |||
CBM6-CBM35-CBM36_like | 831..966 | CDD:271143 | |||
Laminin_EGF | 1375..1423 | CDD:278482 | |||
EGF_Lam | 1420..1457 | CDD:238012 | |||
Laminin_EGF | 1466..1516 | CDD:278482 | |||
Laminin_EGF | 1514..1562 | CDD:278482 | |||
LamB | 1632..1760 | CDD:214597 | |||
Laminin_EGF | <1775..1801 | CDD:278482 | |||
EGF_Lam | 1808..1851 | CDD:238012 | |||
EGF_Lam | 1859..1907 | CDD:214543 | |||
EGF_Lam | 1916..1968 | CDD:238012 | |||
EGF_Lam | 1969..2015 | CDD:238012 | |||
EGF_Lam | 2016..>2054 | CDD:238012 | |||
EGF_Lam | 2063..>2097 | CDD:238012 | |||
Laminin_I | 2129..2385 | CDD:283627 | |||
Tar | 2278..2662 | CDD:223910 | |||
Laminin_II | 2566..2700 | CDD:283628 | |||
LamG | 2674..2843 | CDD:238058 | |||
LamG | 2878..3029 | CDD:238058 | |||
LamG | 3078..3205 | CDD:214598 | |||
LamG | 3349..3512 | CDD:238058 | |||
LamG | 3535..3689 | CDD:238058 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |