DRSC/TRiP Functional Genomics Resources

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Protein Alignment ZRANB2 and zranb2

DIOPT Version :9

Sequence 1:NP_976225.1 Gene:ZRANB2 / 9406 HGNCID:13058 Length:330 Species:Homo sapiens
Sequence 2:NP_001136134.1 Gene:zranb2 / 100135715 XenbaseID:XB-GENE-966832 Length:356 Species:Xenopus tropicalis


Alignment Length:361 Identity:289/361 - (80%)
Similarity:302/361 - (83%) Gaps:37/361 - (10%)


- Green bases have known domain annotations that are detailed below.


Human     1 MSTKNFRVSDGDWICPDKKCGNVNFARRTSCNRCGREKTTEAKMMKAGGTEIGKTLAEKSRGLFS 65
            ||||||||||||||||||||||||||||||||||||||||:||||||||||||||||||||||||
 Frog     1 MSTKNFRVSDGDWICPDKKCGNVNFARRTSCNRCGREKTTDAKMMKAGGTEIGKTLAEKSRGLFS 65

Human    66 ANDWQCKTCSNVNWARRSECNMCNTPKYAKLEERTGYGGGFNERENVEYIEREESDGEYDEFGRK 130
            |||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||
 Frog    66 ANDWQCKTCGNVNWARRSECNMCNTPKYAKLEERTGYGGGFNERENVEYIEREESDGEYDEFGRK 130

Human   131 KKKYRGKAVGPASILKEVEDKESEGEEEDEDEDLSKYKLDED----------------------- 172
            |||||||...|.||||. ::|||||||| |||||||||||:|                       
 Frog   131 KKKYRGKPAVPKSILKG-DEKESEGEEE-EDEDLSKYKLDDDEEEEEEEEEKEKEKDKKTKEEEE 193

Human   173 ------EDEDDADLSKYNLDASEEEDSNKKKSNRRSRSKSRSSHSRSSSRSSSPSSSRSRSRSRS 231
                  ||:||.|||||||.:.:|:||..|||...|||||| |||| |||||| .||||||||||
 Frog   194 EDDDDEEDDDDGDLSKYNLASEDEDDSKNKKSTHSSRSKSR-SHSR-SSRSSS-QSSRSRSRSRS 255

Human   232 RSSSSSQSRSRSSSRERSRSRGSKSRSSSRSHRGSSSPRKRSYSS--SSSSPERNRKRSRSRSSS 294
            ||||||:|||||||||.|||.||||||||||||||||||||||:|  |||||||.:|||||| ||
 Frog   256 RSSSSSRSRSRSSSREYSRSPGSKSRSSSRSHRGSSSPRKRSYASSRSSSSPERGKKRSRSR-SS 319

Human   295 SGDRKKRRTRSRSPERRHRSSSGSSHSGSRSSSKKK 330
            ||||||:|:||||.|||..||||||||||||||.||
 Frog   320 SGDRKKKRSRSRSTERRRGSSSGSSHSGSRSSSSKK 355

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ZRANB2NP_976225.1 ZnF_RBZ 11..35 CDD:197784 23/23 (100%)
RanBP2-type Zn finger 13..34 CDD:275376 20/20 (100%)
ZnF_RBZ 67..91 CDD:197784 22/23 (96%)
RanBP2-type Zn finger 69..88 CDD:275376 17/18 (94%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 117..330 173/243 (71%)
Required for nuclear targeting 151..324 142/203 (70%)
zranb2NP_001136134.1 ZnF_RBZ 11..35 CDD:197784 23/23 (100%)
RanBP2-type Zn finger 13..34 CDD:275376 20/20 (100%)
ZnF_RBZ 67..91 CDD:197784 22/23 (96%)
RanBP2-type Zn finger 69..88 CDD:275376 17/18 (94%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 70 1.000 Domainoid score I36205
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H135921
Inparanoid 1 1.050 532 1.000 Inparanoid score I7279
NCBI 1 1.000 - -
OMA 1 1.010 - - QHG60166
OrthoDB 1 1.010 - - D1399319at2759
OrthoFinder 1 1.000 - - FOG0007371
OrthoInspector 1 1.000 - - oto153665
Panther 1 1.100 - - LDO PTHR12999
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3341
SonicParanoid 1 1.000 - - X5493
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1313.110

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