DRSC/TRiP Functional Genomics Resources

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Protein Alignment LPXN and Pax

DIOPT Version :10

Sequence 1:NP_001137467.1 Gene:LPXN / 9404 HGNCID:14061 Length:391 Species:Homo sapiens
Sequence 2:NP_523601.2 Gene:Pax / 35215 FlyBaseID:FBgn0041789 Length:581 Species:Drosophila melanogaster


Alignment Length:429 Identity:192/429 - (44%)
Similarity:257/429 - (59%) Gaps:62/429 - (14%)


- Green bases have known domain annotations that are detailed below.


Human     8 SSDALLEELERS---TLQDSDEYSNPAPLPLDQH---SRKETNLDETSEILSIQDNTSPLPAQLV 66
            |.|:||:||:.:   .:.:...:.:|.|   .:|   :.:||.    :|.|:..|.    |...|
  Fly   167 SVDSLLKELDNAHIYAVPNGSAHKSPTP---GRHVTITVRETK----TEKLTGPDG----PVGTV 220

Human    67 YTTNIQELNVYSEAQEPKESPPPSK------TSAAAQLDELMAHLTEMQAKVAVRADAGKKH--- 122
            ....:|:.:.|:    |..:.|..:      :.|..:||:|||.|::.:............|   
  Fly   221 EEQIVQQKDSYT----PNHAVPGQQVHQAYTSQATKELDDLMASLSDFKVSNGTNGIGNGSHPQQ 281

Human   123 --------------LPDKQDHKA------------------SLDSMLGGLEQELQDLGIATVPKG 155
                          .|:|...:|                  .||||||.|:..:...|:.||.||
  Fly   282 HSSTVQHQTVTDYARPNKGSQQAHLTQTIEETTIVEDSREDQLDSMLGNLQANMSRQGVNTVQKG 346

Human   156 HCASCQKPIAGKVIHALGQSWHPEHFVCTHCKEEIGSSPFFERSGLAYCPNDYHQLFSPRCAYCA 220
            .|.:|:|||.|:||.|||::||||||.|.||.:|:|:..||||.|..||..|||.|||||||||.
  Fly   347 CCNACEKPIVGQVITALGKTWHPEHFTCNHCSQELGTRNFFERDGFPYCEPDYHNLFSPRCAYCN 411

Human   221 APILDKVLTAMNQTWHPEHFFCSHCGEVFGAEGFHEKDKKPYCRKDFLAMFSPKCGGCNRPVLEN 285
            ..||||.:||:::|||.|||||:.||:.||.|||||:|.|||||.|:..||:|||.||||.::||
  Fly   412 GAILDKCVTALDKTWHTEHFFCAQCGQQFGEEGFHERDGKPYCRNDYFEMFAPKCNGCNRAIMEN 476

Human   286 YLSAMDTVWHPECFVCGDCFTSFSTGSFFELDGRPFCELHYHHRRGTLCHGCGQPITGRCISAMG 350
            |:||:::.|||:||||.||...|..||||:.:|.|:||.|||.:||:||.||.:|||||||:||.
  Fly   477 YISALNSQWHPDCFVCRDCRQPFQGGSFFDHEGLPYCETHYHAKRGSLCAGCSKPITGRCITAMF 541

Human   351 YKFHPEHFVCAFCLTQLSKGIFREQNDKTYCQPCFNKLF 389
            .|||||||||||||.||:||.|:||.||.||..||:|:|
  Fly   542 KKFHPEHFVCAFCLKQLNKGTFKEQKDKPYCHTCFDKIF 580

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LPXNNP_001137467.1 LIM1_Leupaxin 155..209 CDD:188790 31/53 (58%)
LIM2_Leupaxin 216..267 CDD:188792 33/50 (66%)
LIM3_Leupaxin 275..327 CDD:188794 29/51 (57%)
LIM4_Paxillin_like 334..385 CDD:188725 36/50 (72%)
PaxNP_523601.2 LIM1_Paxillin_like 348..400 CDD:259830 30/51 (59%)
LIM2_Paxillin_like 407..458 CDD:188723 33/50 (66%)
LIM3_Paxillin_like 466..518 CDD:188724 29/51 (57%)
LIM4_Paxillin 525..576 CDD:188795 36/50 (72%)

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