DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment LPXN and CG34325

DIOPT Version :10

Sequence 1:NP_001137467.1 Gene:LPXN / 9404 HGNCID:14061 Length:391 Species:Homo sapiens
Sequence 2:NP_001097003.1 Gene:CG34325 / 32656 FlyBaseID:FBgn0085354 Length:179 Species:Drosophila melanogaster


Alignment Length:168 Identity:67/168 - (39%)
Similarity:90/168 - (53%) Gaps:1/168 - (0%)


- Green bases have known domain annotations that are detailed below.


Human   157 CASCQKPIAGKVIHALGQSWHPEHFVCTHCKEEIGSSPFFERSGLAYCPNDYHQLFSPRCAYCAA 221
            |..|.:.|..::|.|||::||||||||..|:..|..:.|....|...|...:...:|..|..|..
  Fly     8 CHKCNEVIQLRIITALGKTWHPEHFVCKDCQCPITEASFNINDGQPVCSACFVSNYSGICHGCKR 72

Human   222 PILDKVLTAMNQTWHPEHFFC-SHCGEVFGAEGFHEKDKKPYCRKDFLAMFSPKCGGCNRPVLEN 285
            |||::.:.||.:|||.|.|.| ..|.:......|:|.|..||||.||..||:.:||.|..|:.||
  Fly    73 PILERTIKAMGETWHEECFLCRGPCMQQLAGSSFYEHDGLPYCRTDFEHMFAARCGNCKAPITEN 137

Human   286 YLSAMDTVWHPECFVCGDCFTSFSTGSFFELDGRPFCE 323
            .:.|:|..||.|||.|..|.|..:..||...|.:|.|:
  Fly   138 AIVALDAKWHRECFKCKKCKTPITASSFVVEDNQPLCK 175

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LPXNNP_001137467.1 LIM1_Leupaxin 155..209 CDD:188790 20/51 (39%)
LIM2_Leupaxin 216..267 CDD:188792 21/51 (41%)
LIM3_Leupaxin 275..327 CDD:188794 21/49 (43%)
LIM4_Paxillin_like 334..385 CDD:188725
CG34325NP_001097003.1 LIM 8..59 CDD:413332 20/50 (40%)
LIM 67..119 CDD:413332 21/51 (41%)
LIM 127..175 CDD:413332 20/47 (43%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.