DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SELENOF and CG7484

DIOPT Version :9

Sequence 1:NP_004252.2 Gene:SELENOF / 9403 HGNCID:17705 Length:165 Species:Homo sapiens
Sequence 2:NP_649000.1 Gene:CG7484 / 39969 FlyBaseID:FBgn0036745 Length:178 Species:Drosophila melanogaster


Alignment Length:146 Identity:72/146 - (49%)
Similarity:93/146 - (63%) Gaps:4/146 - (2%)


- Green bases have known domain annotations that are detailed below.


Human    20 LLLATVLQAVSAFGAEFSSEACRELGF-SSNLLCSSCDLLGQFNLLQLDPDCRGCCQEEAQFETK 83
            ||||...|.:.   ||.::..||.||| .:.|:||||:.|..|.|..:.|.|:.||..:.|...:
  Fly     8 LLLALSCQQIQ---AELTAADCRALGFIKAQLMCSSCEKLDDFGLDTIKPQCKQCCTLDQQPAAQ 69

Human    84 KLYAGAILEVCGUKLGRFPQVQAFVRSDKPKLFRGLQIKYVRGSDPVLKLLDDNGNIAEELSILK 148
            :.||.||||||..|...:||:|||::|.:|..|..||||||||.|||:||||.:|.:.|.|||.|
  Fly    70 RTYAKAILEVCTCKFRAYPQIQAFIQSGRPAKFPNLQIKYVRGLDPVVKLLDASGKVQETLSITK 134

Human   149 WNTDSVEEFLSEKLER 164
            ||||:||||....|.:
  Fly   135 WNTDTVEEFFETHLAK 150

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SELENOFNP_004252.2 Sep15_SelM 88..163 CDD:400935 44/74 (59%)
CG7484NP_649000.1 Sep15_SelM 74..148 CDD:285958 44/73 (60%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165156872
Domainoid 1 1.000 94 1.000 Domainoid score I7519
eggNOG 1 0.900 - - E1_KOG3384
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H3145
Inparanoid 1 1.050 138 1.000 Inparanoid score I4538
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG55610
OrthoDB 1 1.010 - - D1405992at2759
OrthoFinder 1 1.000 - - FOG0006223
OrthoInspector 1 1.000 - - oto90815
orthoMCL 1 0.900 - - OOG6_105650
Panther 1 1.100 - - LDO PTHR13077
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X5163
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1514.770

Return to query results.
Submit another query.