DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ACVRL1 and Acvrl1

DIOPT Version :9

Sequence 1:NP_000011.2 Gene:ACVRL1 / 94 HGNCID:175 Length:503 Species:Homo sapiens
Sequence 2:NP_071886.1 Gene:Acvrl1 / 25237 RGDID:2029 Length:504 Species:Rattus norvegicus


Alignment Length:503 Identity:451/503 - (89%)
Similarity:470/503 - (93%) Gaps:1/503 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     1 MTLGSPRKGLLMLLMAL-VTQGDPVKPSRGPLVTCTCESPHCKGPTCRGAWCTVVLVREEGRHPQ 64
            ||||..|:..|||.:|| :|:||.||||||.||.||||:||||.|.|:|||||||||||:|||||
  Rat     1 MTLGIFRRVFLMLSVALGLTKGDLVKPSRGQLVNCTCENPHCKRPICQGAWCTVVLVREQGRHPQ 65

Human    65 EHRGCGNLHRELCRGRPTEFVNHYCCDSHLCNHNVSLVLEATQPPSEQPGTDGQLALILGPVLAL 129
            .:||||:|::|||.|||||||||:||....|||||||:|||||.|||:|..|..|.|||||||||
  Rat    66 VYRGCGSLNQELCLGRPTEFVNHHCCYRSFCNHNVSLMLEATQTPSEEPEVDAHLPLILGPVLAL 130

Human   130 LALVALGVLGLWHVRRRQEKQRGLHSELGESSLILKASEQGDSMLGDLLDSDCTTGSGSGLPFLV 194
            |.|||||.||||.|||||||||||||:||||||||||||||||||||.|.|||||||||||||||
  Rat   131 LVLVALGTLGLWRVRRRQEKQRGLHSDLGESSLILKASEQGDSMLGDFLVSDCTTGSGSGLPFLV 195

Human   195 QRTVARQVALVECVGKGRYGEVWRGLWHGESVAVKIFSSRDEQSWFRETEIYNTVLLRHDNILGF 259
            |||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||
  Rat   196 QRTVARQVALVECVGKGRYGEVWRGSWHGESVAVKIFSSRDEQSWFRETEIYNTVLLRHDNILGF 260

Human   260 IASDMTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEPHLALRLAVSAACGLAHLHVEIFGTQGKP 324
            |||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||
  Rat   261 IASDMTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEPQLALRLAVSAACGLAHLHVEIFGTQGKP 325

Human   325 AIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMAPEVLDEQIRTDC 389
            ||||||.||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||
  Rat   326 AIAHRDLKSRNVLVKSNLQCCIADLGLAVMHSQSSDYLDIGNNPRVGTKRYMAPEVLDEQIRTDC 390

Human   390 FESYKWTDIWAFGLVLWEIARRTIVNGIVEDYRPPFYDVVPNDPSFEDMKKVVCVDQQTPTIPNR 454
            ||||||||||||||||||||||||:|||||||||||||:||||||||||||||||||||||||||
  Rat   391 FESYKWTDIWAFGLVLWEIARRTIINGIVEDYRPPFYDMVPNDPSFEDMKKVVCVDQQTPTIPNR 455

Human   455 LAADPVLSGLAQMMRECWYPNPSARLTALRIKKTLQKISNSPEKPKVI 502
            |||||||||||||||||||||||||||||||||||||:|.:|||||||
  Rat   456 LAADPVLSGLAQMMRECWYPNPSARLTALRIKKTLQKLSQNPEKPKVI 503

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ACVRL1NP_000011.2 Mediates specificity for BMP ligand 73..76 0/2 (0%)
TGF_beta_GS 173..200 CDD:312125 24/26 (92%)
STKc_ACVR1_ALK1 196..493 CDD:271044 290/296 (98%)
Acvrl1NP_071886.1 Mediates specificity for BMP ligand. /evidence=ECO:0000250 74..77 0/2 (0%)
TGF_beta_GS 174..201 CDD:400699 24/26 (92%)
STKc_ACVR1_ALK1 197..494 CDD:271044 290/296 (98%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C83693754
Domainoid 1 1.000 581 1.000 Domainoid score I5162
eggNOG 1 0.900 - - E2759_KOG2052
HGNC 1 1.500 - -
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H20058
Inparanoid 1 1.050 925 1.000 Inparanoid score I6113
NCBI 1 1.000 - -
OMA 1 1.010 - - QHG37587
OrthoDB 1 1.010 - - D111967at7742
OrthoFinder 1 1.000 - - FOG0000203
OrthoInspector 1 1.000 - - oto142747
orthoMCL 1 0.900 - - OOG6_128294
Panther 1 1.100 - - LDO PTHR23255
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X151
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1717.310

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